Analysis of interatomic Contacts of Structural Units in PDB entry:
8RVC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8RVC entry

There are 2 chains in PDB entry 8RVC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 31ALA 370
B
 ASN 31LEU 336
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 8RVC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 42Right-handed alpha
Helix 2
AA2
A
42 60Right-handed alpha
Helix 3
AA3
A
61 70Right-handed alpha
Helix 4
AA4
A
73 82Right-handed alpha
Helix 5
AA5
A
84 98Right-handed alpha
Helix 6
AA6
A
111 116Right-handed alpha
Helix 7
AA7
A
117 119Right-handed 310
Helix 8
AA8
A
120 128Right-handed alpha
Helix 9
AA9
A
131 137Right-handed alpha
Helix 10
AB1
A
137 142Right-handed alpha
Helix 11
AB2
A
152 165Right-handed alpha
Helix 12
AB3
A
167 178Right-handed alpha
Helix 13
AB4
A
194 204Right-handed alpha
Helix 14
AB5
A
215 229Right-handed alpha
Helix 15
AB6
A
241 248Right-handed alpha
Helix 16
AB7
A
262 271Right-handed alpha
Helix 17
AB8
A
271 286Right-handed alpha
Helix 18
AB9
A
304 307Right-handed 310
Helix 19
AC1
A
308 314Right-handed alpha
Helix 20
AC2
A
314 325Right-handed alpha
Helix 21
AC3
A
331 342Right-handed alpha
Helix 22
AC4
B
33 42Right-handed alpha
Helix 23
AC5
B
42 60Right-handed alpha
Helix 24
AC6
B
61 70Right-handed alpha
Helix 25
AC7
B
73 82Right-handed alpha
Helix 26
AC8
B
84 98Right-handed alpha
Helix 27
AC9
B
111 116Right-handed alpha
Helix 28
AD1
B
117 119Right-handed 310
Helix 29
AD2
B
120 128Right-handed alpha
Helix 30
AD3
B
131 137Right-handed alpha
Helix 31
AD4
B
137 142Right-handed alpha
Helix 32
AD5
B
152 165Right-handed alpha
Helix 33
AD6
B
167 178Right-handed alpha
Helix 34
AD7
B
194 204Right-handed alpha
Helix 35
AD8
B
215 230Right-handed alpha
Helix 36
AD9
B
241 248Right-handed alpha
Helix 37
AE1
B
262 271Right-handed alpha
Helix 38
AE2
B
271 286Right-handed alpha
Helix 39
AE3
B
304 307Right-handed 310
Helix 40
AE4
B
308 314Right-handed alpha
Helix 41
AE5
B
314 325Right-handed alpha
Helix 42
AE6
B
331 342Right-handed alpha
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There are 4 sheets in PDB entry 8RVC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
101 103first strand
Strand 2
A
108 110anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
235 239first strand
Strand 2
A
208 213parallel
Strand 3
A
185 189parallel
Strand 4
A
256 260parallel
Strand 5
A
290 296parallel
Strand 6
A
362 369anti-parallel
Strand 7
A
344 351anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
101 103first strand
Strand 2
B
108 110anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
235 239first strand
Strand 2
B
208 213parallel
Strand 3
B
185 189parallel
Strand 4
B
256 260parallel
Strand 5
B
290 296parallel
Strand 6
B
362 369anti-parallel
Strand 7
B
344 351anti-parallel
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