Analysis of interatomic Contacts of Structural Units in PDB entry:
8RVX

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8RVX entry

There are 3 chains in PDB entry 8RVX (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 19	GLU 513
B	LEU 18	GLU 514
C	HIS 21	PHE 308

There are 74 helices in PDB entry 8RVX. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	48	54	Right-handed alpha
Helix 2	AA2	A	56	61	Right-handed alpha
Helix 3	AA3	A	64	70	Right-handed alpha
Helix 4	AA4	A	82	89	Right-handed alpha
Helix 5	AA5	A	133	149	Right-handed alpha
Helix 6	AA6	A	152	169	Right-handed alpha
Helix 7	AA7	A	204	208	Right-handed 310
Helix 8	AA8	A	209	217	Right-handed alpha
Helix 9	AA9	A	257	268	Right-handed alpha
Helix 10	AB1	A	298	345	Right-handed alpha
Helix 11	AB2	A	347	355	Right-handed alpha
Helix 12	AB3	A	355	362	Right-handed alpha
Helix 13	AB4	A	384	399	Right-handed alpha
Helix 14	AB5	A	408	412	Right-handed 310
Helix 15	AB6	A	413	418	Right-handed 310
Helix 16	AB7	A	470	483	Right-handed alpha
Helix 17	AB8	A	490	509	Right-handed alpha
Helix 18	AB9	B	48	54	Right-handed alpha
Helix 19	AC1	B	56	61	Right-handed alpha
Helix 20	AC2	B	64	69	Right-handed alpha
Helix 21	AC3	B	84	90	Right-handed alpha
Helix 22	AC4	B	133	149	Right-handed alpha
Helix 23	AC5	B	152	169	Right-handed alpha
Helix 24	AC6	B	204	208	Right-handed 310
Helix 25	AC7	B	209	216	Right-handed alpha
Helix 26	AC8	B	257	266	Right-handed alpha
Helix 27	AC9	B	298	345	Right-handed alpha
Helix 28	AD1	B	347	355	Right-handed alpha
Helix 29	AD2	B	355	362	Right-handed alpha
Helix 30	AD3	B	384	399	Right-handed alpha
Helix 31	AD4	B	408	412	Right-handed 310
Helix 32	AD5	B	413	418	Right-handed 310
Helix 33	AD6	B	445	450	Right-handed 310
Helix 34	AD7	B	470	483	Right-handed alpha
Helix 35	AD8	B	490	514	Right-handed alpha
Helix 36	AD9	C	48	54	Right-handed alpha
Helix 37	AE1	C	56	61	Right-handed alpha
Helix 38	AE2	C	64	69	Right-handed alpha
Helix 39	AE3	C	82	89	Right-handed alpha
Helix 40	AE4	C	133	149	Right-handed alpha
Helix 41	AE5	C	153	169	Right-handed alpha
Helix 42	AE6	C	204	208	Right-handed 310
Helix 43	AE7	C	209	217	Right-handed alpha
Helix 44	AE8	C	247	251	Right-handed 310
Helix 45	AE9	C	257	266	Right-handed alpha
Helix 46	AF1	C	298	345	Right-handed alpha
Helix 47	AF2	C	347	355	Right-handed alpha
Helix 48	AF3	C	355	362	Right-handed alpha
Helix 49	AF4	C	384	399	Right-handed alpha
Helix 50	AF5	C	408	412	Right-handed 310
Helix 51	AF6	C	413	418	Right-handed 310
Helix 52	AF7	C	443	448	Right-handed 310
Helix 53	AF8	C	453	457	Right-handed 310
Helix 54	AF9	C	470	483	Right-handed alpha
Helix 55	AG1	C	490	512	Right-handed alpha
Helix 56	AG2	D	19	23	Right-handed 310
Helix 57	AG3	D	48	54	Right-handed alpha
Helix 58	AG4	D	56	61	Right-handed alpha
Helix 59	AG5	D	64	69	Right-handed alpha
Helix 60	AG6	D	82	89	Right-handed alpha
Helix 61	AG7	D	131	149	Right-handed alpha
Helix 62	AG8	D	152	169	Right-handed alpha
Helix 63	AG9	D	204	208	Right-handed 310
Helix 64	AH1	D	209	217	Right-handed alpha
Helix 65	AH2	D	257	266	Right-handed alpha
Helix 66	AH3	D	298	345	Right-handed alpha
Helix 67	AH4	D	347	354	Right-handed alpha
Helix 68	AH5	D	355	362	Right-handed alpha
Helix 69	AH6	D	384	399	Right-handed alpha
Helix 70	AH7	D	408	413	Right-handed alpha
Helix 71	AH8	D	414	418	Right-handed 310
Helix 72	AH9	D	443	447	Right-handed 310
Helix 73	AI1	D	470	482	Right-handed alpha
Helix 74	AI2	D	490	514	Right-handed alpha

There are 12 sheets in PDB entry 8RVX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	92	98	first strand
Strand 2	A	102	112	anti-parallel
Strand 3	A	118	125	anti-parallel
Strand 4	A	31	35	anti-parallel
Strand 5	A	42	46	anti-parallel
Strand 6	A	234	235	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	184	191	first strand
Strand 2	A	172	178	anti-parallel
Strand 3	A	282	291	anti-parallel
Strand 4	A	271	279	anti-parallel
Strand 5	A	221	224	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	375	380	first strand
Strand 2	A	367	372	anti-parallel
Strand 3	A	435	441	anti-parallel
Strand 4	A	425	431	anti-parallel
Strand 5	A	404	406	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	92	96	first strand
Strand 2	B	104	112	anti-parallel
Strand 3	B	118	124	anti-parallel
Strand 4	B	31	35	anti-parallel
Strand 5	B	42	46	anti-parallel
Strand 6	B	234	235	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	202	203	first strand
Strand 2	B	184	191	anti-parallel
Strand 3	B	172	178	anti-parallel
Strand 4	B	282	291	anti-parallel
Strand 5	B	271	279	anti-parallel
Strand 6	B	221	224	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	375	380	first strand
Strand 2	B	367	372	anti-parallel
Strand 3	B	436	441	anti-parallel
Strand 4	B	425	430	anti-parallel
Strand 5	B	404	406	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	42	45	first strand
Strand 2	C	31	35	anti-parallel
Strand 3	C	118	125	anti-parallel
Strand 4	C	102	112	anti-parallel
Strand 5	C	92	98	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	184	191	first strand
Strand 2	C	172	178	anti-parallel
Strand 3	C	282	291	anti-parallel
Strand 4	C	271	279	anti-parallel
Strand 5	C	221	224	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	375	380	first strand
Strand 2	C	367	372	anti-parallel
Strand 3	C	436	441	anti-parallel
Strand 4	C	425	430	anti-parallel
Strand 5	C	404	406	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	92	97	first strand
Strand 2	D	103	112	anti-parallel
Strand 3	D	118	124	anti-parallel
Strand 4	D	31	35	anti-parallel
Strand 5	D	42	46	anti-parallel
Strand 6	D	234	235	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	184	191	first strand
Strand 2	D	172	178	anti-parallel
Strand 3	D	282	291	anti-parallel
Strand 4	D	271	279	anti-parallel
Strand 5	D	221	224	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	375	380	first strand
Strand 2	D	367	372	anti-parallel
Strand 3	D	436	441	anti-parallel
Strand 4	D	425	429	anti-parallel
Strand 5	D	404	406	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8RVX

Analysis of interatomic Contacts of Structural Units in PDB entry:
8RVX