Analysis of interatomic Contacts of Structural Units in PDB entry:
8RWB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8RWB entry

There are 3 chains in PDB entry 8RWB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
P
 ASP 29GLY 200
H
 VAL 21SER 237
L
 ASP 20GLU 231
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 8RWB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
P
41 44Right-handed 310
Helix 2
AA2
P
85 108Right-handed alpha
Helix 3
AA3
P
162 164Right-handed 310
Helix 4
AA4
P
165 175Right-handed alpha
Helix 5
AA5
P
175 188Right-handed alpha
Helix 6
AA6
P
188 200Right-handed alpha
Helix 7
AA7
H
47 51Right-handed 310
Helix 8
AA8
H
81 84Right-handed 310
Helix 9
AA9
H
106 110Right-handed 310
Helix 10
AB1
H
209 212Right-handed 310
Helix 11
AB2
H
223 226Right-handed 310
Helix 12
AB3
L
97 101Right-handed 310
Helix 13
AB4
L
139 145Right-handed alpha
Helix 14
AB5
L
200 207Right-handed alpha
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There are 10 sheets in PDB entry 8RWB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
P
71 73first strand
Strand 2
P
60 65anti-parallel
Strand 3
P
50 56anti-parallel
Strand 4
P
31 39anti-parallel
Strand 5
P
121 129anti-parallel
Strand 6
P
135 143anti-parallel
Strand 7
P
146 152anti-parallel
Strand 8
P
157 160anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
22 26first strand
Strand 2
H
37 44anti-parallel
Strand 3
H
97 102anti-parallel
Strand 4
H
87 92anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
30 31first strand
Strand 2
H
129 133parallel
Strand 3
H
111 118anti-parallel
Strand 4
H
52 58anti-parallel
Strand 5
H
64 70anti-parallel
Strand 6
H
77 79anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
30 31first strand
Strand 2
H
129 133parallel
Strand 3
H
111 118anti-parallel
Strand 4
H
122 125anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
142 146first strand
Strand 2
H
157 167anti-parallel
Strand 3
H
198 207anti-parallel
Strand 4
H
191 192anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
173 176first strand
Strand 2
H
217 222anti-parallel
Strand 3
H
227 232anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
23 26first strand
Strand 2
L
38 44anti-parallel
Strand 3
L
88 93anti-parallel
Strand 4
L
80 85anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
29 33first strand
Strand 2
L
120 125parallel
Strand 3
L
102 108anti-parallel
Strand 4
L
51 56anti-parallel
Strand 5
L
63 67anti-parallel
Strand 6
L
71 72anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
132 136first strand
Strand 2
L
148 157anti-parallel
Strand 3
L
191 199anti-parallel
Strand 4
L
177 181anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
162 168first strand
Strand 2
L
209 216anti-parallel
Strand 3
L
223 228anti-parallel
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