Analysis of interatomic Contacts of Structural Units in PDB entry:
8RWN

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8RWN entry

There are 6 chains in PDB entry 8RWN (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
b	MET 1	CYS 283
B	MET 1	CYS 283
c	MET 1	GLU 185
C	MET 1	GLU 185
A	SER 149	GLU 576
a	SER 149	GLU 576

There are 88 helices in PDB entry 8RWN. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	b	9	14	Right-handed alpha
Helix 2	AA2	b	15	29	Right-handed alpha
Helix 3	AA3	b	44	52	Right-handed alpha
Helix 4	AA4	b	52	71	Right-handed alpha
Helix 5	AA5	b	78	95	Right-handed alpha
Helix 6	AA6	b	95	107	Right-handed alpha
Helix 7	AA7	b	122	130	Right-handed alpha
Helix 8	AA8	b	131	139	Right-handed alpha
Helix 9	AA9	b	158	163	Right-handed alpha
Helix 10	AB1	b	171	180	Right-handed alpha
Helix 11	AB2	b	196	198	Right-handed 310
Helix 12	AB3	b	199	204	Right-handed alpha
Helix 13	AB4	b	204	222	Right-handed alpha
Helix 14	AB5	b	231	250	Right-handed alpha
Helix 15	AB6	b	260	268	Right-handed alpha
Helix 16	AB7	b	271	276	Right-handed alpha
Helix 17	AB8	b	277	280	Right-handed 310
Helix 18	AB9	B	9	14	Right-handed alpha
Helix 19	AC1	B	15	29	Right-handed alpha
Helix 20	AC2	B	44	52	Right-handed alpha
Helix 21	AC3	B	52	71	Right-handed alpha
Helix 22	AC4	B	78	95	Right-handed alpha
Helix 23	AC5	B	95	107	Right-handed alpha
Helix 24	AC6	B	108	110	Right-handed 310
Helix 25	AC7	B	122	130	Right-handed alpha
Helix 26	AC8	B	131	138	Right-handed alpha
Helix 27	AC9	B	158	163	Right-handed alpha
Helix 28	AD1	B	171	180	Right-handed alpha
Helix 29	AD2	B	196	198	Right-handed 310
Helix 30	AD3	B	199	204	Right-handed alpha
Helix 31	AD4	B	204	222	Right-handed alpha
Helix 32	AD5	B	231	250	Right-handed alpha
Helix 33	AD6	B	260	268	Right-handed alpha
Helix 34	AD7	B	276	280	Right-handed 310
Helix 35	AD8	c	12	16	Right-handed 310
Helix 36	AD9	c	17	27	Right-handed alpha
Helix 37	AE1	c	29	35	Right-handed 310
Helix 38	AE2	c	39	45	Right-handed alpha
Helix 39	AE3	c	54	65	Right-handed alpha
Helix 40	AE4	c	66	72	Right-handed alpha
Helix 41	AE5	c	73	79	Right-handed 310
Helix 42	AE6	c	83	89	Right-handed alpha
Helix 43	AE7	c	94	109	Right-handed alpha
Helix 44	AE8	c	113	127	Right-handed alpha
Helix 45	AE9	c	133	143	Right-handed alpha
Helix 46	AF1	c	155	169	Right-handed alpha
Helix 47	AF2	c	170	175	Right-handed alpha
Helix 48	AF3	C	12	16	Right-handed 310
Helix 49	AF4	C	17	27	Right-handed alpha
Helix 50	AF5	C	29	35	Right-handed 310
Helix 51	AF6	C	39	45	Right-handed alpha
Helix 52	AF7	C	54	65	Right-handed alpha
Helix 53	AF8	C	66	72	Right-handed alpha
Helix 54	AF9	C	73	79	Right-handed 310
Helix 55	AG1	C	83	89	Right-handed alpha
Helix 56	AG2	C	94	109	Right-handed alpha
Helix 57	AG3	C	113	127	Right-handed alpha
Helix 58	AG4	C	133	143	Right-handed alpha
Helix 59	AG5	C	155	169	Right-handed alpha
Helix 60	AG6	C	170	175	Right-handed alpha
Helix 61	AG7	A	160	173	Right-handed alpha
Helix 62	AG8	A	189	193	Right-handed 310
Helix 63	AG9	A	203	217	Right-handed alpha
Helix 64	AH1	A	258	264	Right-handed alpha
Helix 65	AH2	A	271	274	Right-handed 310
Helix 66	AH3	A	305	311	Right-handed alpha
Helix 67	AH4	A	342	350	Right-handed 310
Helix 68	AH5	A	360	368	Right-handed alpha
Helix 69	AH6	A	399	403	Right-handed 310
Helix 70	AH7	A	410	426	Right-handed alpha
Helix 71	AH8	A	444	455	Right-handed alpha
Helix 72	AH9	A	507	516	Right-handed alpha
Helix 73	AI1	A	546	550	Right-handed 310
Helix 74	AI2	A	553	575	Right-handed alpha
Helix 75	AI3	a	160	173	Right-handed alpha
Helix 76	AI4	a	189	193	Right-handed 310
Helix 77	AI5	a	203	217	Right-handed alpha
Helix 78	AI6	a	258	264	Right-handed alpha
Helix 79	AI7	a	271	274	Right-handed 310
Helix 80	AI8	a	305	311	Right-handed alpha
Helix 81	AI9	a	342	350	Right-handed 310
Helix 82	AJ1	a	360	368	Right-handed alpha
Helix 83	AJ2	a	399	403	Right-handed 310
Helix 84	AJ3	a	410	426	Right-handed alpha
Helix 85	AJ4	a	444	455	Right-handed alpha
Helix 86	AJ5	a	507	516	Right-handed alpha
Helix 87	AJ6	a	546	550	Right-handed 310
Helix 88	AJ7	a	553	575	Right-handed alpha

There are 21 sheets in PDB entry 8RWN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	32	35	first strand
Strand 2	b	2	5	parallel
Strand 3	b	74	76	parallel
Strand 4	b	119	121	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	183	184	first strand
Strand 2	b	146	150	parallel
Strand 3	b	226	229	parallel
Strand 4	b	257	259	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	32	35	first strand
Strand 2	B	2	6	parallel
Strand 3	B	74	76	parallel
Strand 4	B	119	121	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	183	184	first strand
Strand 2	B	146	150	parallel
Strand 3	B	226	229	parallel
Strand 4	B	257	259	parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	10	11	first strand
Strand 2	a	487	493	parallel
Strand 3	a	476	482	anti-parallel
Strand 4	a	467	470	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	10	11	first strand
Strand 2	A	487	493	parallel
Strand 3	A	476	482	anti-parallel
Strand 4	A	467	470	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	177	178	first strand
Strand 2	C	183	184	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	220	223	first strand
Strand 2	A	176	180	parallel
Strand 3	A	153	157	parallel
Strand 4	A	331	334	parallel
Strand 5	A	542	544	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	195	196	first strand
Strand 2	A	201	202	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	226	234	first strand
Strand 2	A	237	244	anti-parallel
Strand 3	A	323	329	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	267	269	first strand
Strand 2	A	278	280	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	282	283	first strand
Strand 2	A	295	296	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	339	340	first strand
Strand 2	A	502	503	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	357	359	first strand
Strand 2	A	495	500	parallel
Strand 3	A	388	395	parallel
Strand 4	A	430	435	parallel
Strand 5	A	459	462	parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	220	223	first strand
Strand 2	a	176	180	parallel
Strand 3	a	153	157	parallel
Strand 4	a	331	334	parallel
Strand 5	a	542	544	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	195	196	first strand
Strand 2	a	201	202	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	226	232	first strand
Strand 2	a	238	244	anti-parallel
Strand 3	a	323	329	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	267	269	first strand
Strand 2	a	278	280	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	282	283	first strand
Strand 2	a	295	296	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	339	340	first strand
Strand 2	a	502	503	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	357	359	first strand
Strand 2	a	495	500	parallel
Strand 3	a	388	395	parallel
Strand 4	a	430	435	parallel
Strand 5	a	459	462	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8RWN

Analysis of interatomic Contacts of Structural Units in PDB entry:
8RWN