Analysis of interatomic Contacts of Structural Units in PDB entry:
8RWZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8RWZ entry

There are 6 chains in PDB entry 8RWZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 347GLU 460
B
 LEU 63HIS 208
C
 MET 1LYS 104
D
 ALA 16CYS 112
E
 MET 1GLN 658
R
 LYS 20HIS 108
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 8RWZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
351 365Right-handed alpha
Helix 2
AA2
A
366 374Right-handed alpha
Helix 3
AA3
A
375 378Right-handed 310
Helix 4
AA4
A
389 394Right-handed alpha
Helix 5
AA5
A
399 409Right-handed alpha
Helix 6
AA6
A
414 433Right-handed alpha
Helix 7
AA7
A
437 455Right-handed alpha
Helix 8
AA8
B
129 133Right-handed 310
Helix 9
AA9
B
157 170Right-handed alpha
Helix 10
AB1
B
183 190Right-handed alpha
Helix 11
AB2
B
193 208Right-handed alpha
Helix 12
AB3
C
23 36Right-handed alpha
Helix 13
AB4
C
56 61Right-handed 310
Helix 14
AB5
D
33 37Right-handed 310
Helix 15
AB6
D
39 46Right-handed alpha
Helix 16
AB7
D
66 84Right-handed alpha
Helix 17
AB8
D
99 111Right-handed alpha
Helix 18
AB9
E
9 26Right-handed alpha
Helix 19
AC1
E
31 47Right-handed alpha
Helix 20
AC2
E
53 78Right-handed alpha
Helix 21
AC3
E
82 100Right-handed alpha
Helix 22
AC4
E
105 111Right-handed alpha
Helix 23
AC5
E
138 151Right-handed alpha
Helix 24
AC6
E
151 173Right-handed alpha
Helix 25
AC7
E
177 190Right-handed alpha
Helix 26
AC8
E
200 207Right-handed alpha
Helix 27
AC9
E
207 230Right-handed alpha
Helix 28
AD1
E
231 254Right-handed alpha
Helix 29
AD2
E
258 271Right-handed alpha
Helix 30
AD3
E
274 289Right-handed alpha
Helix 31
AD4
E
290 303Right-handed alpha
Helix 32
AD5
E
308 329Right-handed alpha
Helix 33
AD6
E
330 333Right-handed 310
Helix 34
AD7
E
334 358Right-handed alpha
Helix 35
AD8
E
361 377Right-handed alpha
Helix 36
AD9
E
386 400Right-handed alpha
Helix 37
AE1
E
407 423Right-handed alpha
Helix 38
AE2
E
427 445Right-handed alpha
Helix 39
AE3
E
450 466Right-handed alpha
Helix 40
AE4
E
466 496Right-handed alpha
Helix 41
AE5
E
530 545Right-handed alpha
Helix 42
AE6
E
579 588Right-handed alpha
Helix 43
AE7
E
596 604Right-handed alpha
Helix 44
AE8
E
606 620Right-handed alpha
Helix 45
AE9
R
53 58Right-handed alpha
Helix 46
AF1
R
63 67Right-handed 310
Helix 47
AF2
R
81 86Right-handed alpha
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There are 7 sheets in PDB entry 8RWZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
71 72first strand
Strand 2
B
111 112anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
119 120first strand
Strand 2
B
127 128anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
14 19first strand
Strand 2
C
2 8anti-parallel
Strand 3
C
74 81parallel
Strand 4
C
42 46anti-parallel
Strand 5
C
49 50anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
14 19first strand
Strand 2
C
2 8anti-parallel
Strand 3
C
74 81parallel
Strand 4
C
84 85anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
29 30first strand
Strand 2
D
20 22anti-parallel
Strand 3
D
60 61parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
561 562first strand
Strand 2
E
577 578anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
593 595first strand
Strand 2
E
637 640anti-parallel
Strand 3
E
623 624anti-parallel
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