Analysis of interatomic Contacts of Structural Units in PDB entry:
8RX5

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8RX5 entry

There are 6 chains in PDB entry 8RX5 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ARG 459
B	MET 1	ARG 459
C	MET 1	ARG 459
D	MET 1	ARG 459
E	MET 1	ARG 459
F	MET 1	ARG 459

There are122 helices in PDB entry 8RX5. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	13	17	Right-handed 310
Helix 2	AA2	A	19	23	Right-handed 310
Helix 3	AA3	A	37	43	Right-handed alpha
Helix 4	AA4	A	43	62	Right-handed alpha
Helix 5	AA5	A	63	66	Right-handed 310
Helix 6	AA6	A	76	101	Right-handed alpha
Helix 7	AA7	A	149	156	Right-handed alpha
Helix 8	AA8	A	164	168	Right-handed 310
Helix 9	AA9	A	181	194	Right-handed alpha
Helix 10	AB1	A	212	227	Right-handed alpha
Helix 11	AB2	A	270	273	Right-handed 310
Helix 12	AB3	A	275	279	Right-handed 310
Helix 13	AB4	A	304	307	Right-handed 310
Helix 14	AB5	A	312	327	Right-handed alpha
Helix 15	AB6	A	333	337	Right-handed 310
Helix 16	AB7	A	361	368	Right-handed alpha
Helix 17	AB8	A	382	389	Right-handed alpha
Helix 18	AB9	A	415	420	Right-handed alpha
Helix 19	AC1	A	420	430	Right-handed alpha
Helix 20	AC2	A	432	439	Right-handed alpha
Helix 21	AC3	A	448	457	Right-handed alpha
Helix 22	AC4	B	13	17	Right-handed 310
Helix 23	AC5	B	19	23	Right-handed 310
Helix 24	AC6	B	37	43	Right-handed alpha
Helix 25	AC7	B	43	62	Right-handed alpha
Helix 26	AC8	B	63	66	Right-handed 310
Helix 27	AC9	B	76	101	Right-handed alpha
Helix 28	AD1	B	149	156	Right-handed alpha
Helix 29	AD2	B	164	168	Right-handed 310
Helix 30	AD3	B	181	194	Right-handed alpha
Helix 31	AD4	B	212	227	Right-handed alpha
Helix 32	AD5	B	270	273	Right-handed 310
Helix 33	AD6	B	275	279	Right-handed 310
Helix 34	AD7	B	304	307	Right-handed 310
Helix 35	AD8	B	312	327	Right-handed alpha
Helix 36	AD9	B	333	337	Right-handed 310
Helix 37	AE1	B	361	368	Right-handed alpha
Helix 38	AE2	B	382	389	Right-handed alpha
Helix 39	AE3	B	415	430	Right-handed alpha
Helix 40	AE4	B	432	439	Right-handed alpha
Helix 41	AE5	B	448	457	Right-handed alpha
Helix 42	AE6	C	13	17	Right-handed 310
Helix 43	AE7	C	19	23	Right-handed 310
Helix 44	AE8	C	37	43	Right-handed alpha
Helix 45	AE9	C	43	62	Right-handed alpha
Helix 46	AF1	C	63	66	Right-handed 310
Helix 47	AF2	C	76	101	Right-handed alpha
Helix 48	AF3	C	149	156	Right-handed alpha
Helix 49	AF4	C	164	168	Right-handed 310
Helix 50	AF5	C	181	194	Right-handed alpha
Helix 51	AF6	C	212	227	Right-handed alpha
Helix 52	AF7	C	270	273	Right-handed 310
Helix 53	AF8	C	275	279	Right-handed 310
Helix 54	AF9	C	304	307	Right-handed 310
Helix 55	AG1	C	312	327	Right-handed alpha
Helix 56	AG2	C	333	337	Right-handed 310
Helix 57	AG3	C	361	368	Right-handed alpha
Helix 58	AG4	C	382	389	Right-handed alpha
Helix 59	AG5	C	415	429	Right-handed alpha
Helix 60	AG6	C	432	439	Right-handed alpha
Helix 61	AG7	C	448	457	Right-handed alpha
Helix 62	AG8	D	13	17	Right-handed 310
Helix 63	AG9	D	19	23	Right-handed 310
Helix 64	AH1	D	37	43	Right-handed alpha
Helix 65	AH2	D	43	62	Right-handed alpha
Helix 66	AH3	D	63	66	Right-handed 310
Helix 67	AH4	D	76	101	Right-handed alpha
Helix 68	AH5	D	149	156	Right-handed alpha
Helix 69	AH6	D	164	168	Right-handed 310
Helix 70	AH7	D	181	194	Right-handed alpha
Helix 71	AH8	D	212	227	Right-handed alpha
Helix 72	AH9	D	270	273	Right-handed 310
Helix 73	AI1	D	275	279	Right-handed 310
Helix 74	AI2	D	304	307	Right-handed 310
Helix 75	AI3	D	312	327	Right-handed alpha
Helix 76	AI4	D	333	337	Right-handed 310
Helix 77	AI5	D	361	368	Right-handed alpha
Helix 78	AI6	D	382	389	Right-handed alpha
Helix 79	AI7	D	415	429	Right-handed alpha
Helix 80	AI8	D	432	439	Right-handed alpha
Helix 81	AI9	D	448	457	Right-handed alpha
Helix 82	AJ1	E	13	17	Right-handed 310
Helix 83	AJ2	E	19	23	Right-handed 310
Helix 84	AJ3	E	37	43	Right-handed alpha
Helix 85	AJ4	E	43	62	Right-handed alpha
Helix 86	AJ5	E	63	66	Right-handed 310
Helix 87	AJ6	E	76	101	Right-handed alpha
Helix 88	AJ7	E	149	156	Right-handed alpha
Helix 89	AJ8	E	164	168	Right-handed 310
Helix 90	AJ9	E	181	194	Right-handed alpha
Helix 91	AK1	E	212	227	Right-handed alpha
Helix 92	AK2	E	270	273	Right-handed 310
Helix 93	AK3	E	275	279	Right-handed 310
Helix 94	AK4	E	304	307	Right-handed 310
Helix 95	AK5	E	312	327	Right-handed alpha
Helix 96	AK6	E	333	337	Right-handed 310
Helix 97	AK7	E	361	368	Right-handed alpha
Helix 98	AK8	E	382	389	Right-handed alpha
Helix 99	AK9	E	415	429	Right-handed alpha
Helix 100	AL1	E	432	439	Right-handed alpha
Helix 101	AL2	E	448	457	Right-handed alpha
Helix 102	AL3	F	13	17	Right-handed 310
Helix 103	AL4	F	19	23	Right-handed 310
Helix 104	AL5	F	37	43	Right-handed alpha
Helix 105	AL6	F	43	62	Right-handed alpha
Helix 106	AL7	F	63	66	Right-handed 310
Helix 107	AL8	F	76	101	Right-handed alpha
Helix 108	AL9	F	149	156	Right-handed alpha
Helix 109	AM1	F	164	168	Right-handed 310
Helix 110	AM2	F	181	194	Right-handed alpha
Helix 111	AM3	F	212	227	Right-handed alpha
Helix 112	AM4	F	270	273	Right-handed 310
Helix 113	AM5	F	275	279	Right-handed 310
Helix 114	AM6	F	304	307	Right-handed 310
Helix 115	AM7	F	312	327	Right-handed alpha
Helix 116	AM8	F	333	337	Right-handed 310
Helix 117	AM9	F	361	368	Right-handed alpha
Helix 118	AN1	F	382	389	Right-handed alpha
Helix 119	AN2	F	415	420	Right-handed alpha
Helix 120	AN3	F	420	430	Right-handed alpha
Helix 121	AN4	F	432	439	Right-handed alpha
Helix 122	AN5	F	448	457	Right-handed alpha

There are 45 sheets in PDB entry 8RX5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	105	108	first strand
Strand 2	A	27	30	parallel
Strand 3	A	2	9	parallel
Strand 4	A	132	140	parallel
Strand 5	A	123	127	anti-parallel
Strand 6	A	112	114	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	105	108	first strand
Strand 2	A	27	30	parallel
Strand 3	A	2	9	parallel
Strand 4	A	132	140	parallel
Strand 5	A	300	302	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	68	75	first strand
Strand 2	B	68	75	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	144	146	first strand
Strand 2	A	266	268	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	228	230	first strand
Strand 2	A	197	201	parallel
Strand 3	A	174	178	parallel
Strand 4	A	259	262	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	235	241	first strand
Strand 2	A	244	249	anti-parallel
Strand 3	A	254	257	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	282	283	first strand
Strand 2	A	286	287	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	346	349	first strand
Strand 2	A	355	359	anti-parallel
Strand 3	A	406	412	anti-parallel
Strand 4	A	394	400	anti-parallel
Strand 5	A	372	378	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	105	108	first strand
Strand 2	B	27	30	parallel
Strand 3	B	2	9	parallel
Strand 4	B	132	140	parallel
Strand 5	B	123	127	anti-parallel
Strand 6	B	112	114	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	105	108	first strand
Strand 2	B	27	30	parallel
Strand 3	B	2	9	parallel
Strand 4	B	132	140	parallel
Strand 5	B	300	302	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	144	146	first strand
Strand 2	B	266	268	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	228	230	first strand
Strand 2	B	197	201	parallel
Strand 3	B	174	178	parallel
Strand 4	B	259	262	parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	235	241	first strand
Strand 2	B	244	249	anti-parallel
Strand 3	B	254	257	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	282	283	first strand
Strand 2	B	286	287	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	346	349	first strand
Strand 2	B	355	359	anti-parallel
Strand 3	B	406	412	anti-parallel
Strand 4	B	394	400	anti-parallel
Strand 5	B	372	378	anti-parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	105	108	first strand
Strand 2	C	27	30	parallel
Strand 3	C	2	9	parallel
Strand 4	C	132	140	parallel
Strand 5	C	123	127	anti-parallel
Strand 6	C	112	114	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	105	108	first strand
Strand 2	C	27	30	parallel
Strand 3	C	2	9	parallel
Strand 4	C	132	140	parallel
Strand 5	C	300	302	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	68	75	first strand
Strand 2	D	68	75	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	144	146	first strand
Strand 2	C	266	268	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	228	230	first strand
Strand 2	C	197	201	parallel
Strand 3	C	174	178	parallel
Strand 4	C	259	262	parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	235	241	first strand
Strand 2	C	244	249	anti-parallel
Strand 3	C	254	257	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	282	283	first strand
Strand 2	C	286	287	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	346	349	first strand
Strand 2	C	355	359	anti-parallel
Strand 3	C	406	412	anti-parallel
Strand 4	C	394	400	anti-parallel
Strand 5	C	372	378	anti-parallel

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There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	105	108	first strand
Strand 2	D	27	30	parallel
Strand 3	D	2	9	parallel
Strand 4	D	132	140	parallel
Strand 5	D	123	127	anti-parallel
Strand 6	D	112	114	anti-parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	105	108	first strand
Strand 2	D	27	30	parallel
Strand 3	D	2	9	parallel
Strand 4	D	132	140	parallel
Strand 5	D	300	302	parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	144	146	first strand
Strand 2	D	266	268	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	228	230	first strand
Strand 2	D	197	201	parallel
Strand 3	D	174	178	parallel
Strand 4	D	259	262	parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	235	241	first strand
Strand 2	D	244	249	anti-parallel
Strand 3	D	254	257	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	282	283	first strand
Strand 2	D	286	287	anti-parallel

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There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	346	349	first strand
Strand 2	D	355	359	anti-parallel
Strand 3	D	406	412	anti-parallel
Strand 4	D	394	400	anti-parallel
Strand 5	D	372	378	anti-parallel

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There are 6 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	105	108	first strand
Strand 2	E	27	30	parallel
Strand 3	E	2	9	parallel
Strand 4	E	132	140	parallel
Strand 5	E	123	127	anti-parallel
Strand 6	E	112	114	anti-parallel

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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	105	108	first strand
Strand 2	E	27	30	parallel
Strand 3	E	2	9	parallel
Strand 4	E	132	140	parallel
Strand 5	E	300	302	parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	68	75	first strand
Strand 2	F	68	75	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	144	146	first strand
Strand 2	E	266	268	anti-parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	228	230	first strand
Strand 2	E	197	201	parallel
Strand 3	E	174	178	parallel
Strand 4	E	259	262	parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	235	241	first strand
Strand 2	E	244	249	anti-parallel
Strand 3	E	254	257	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	282	283	first strand
Strand 2	E	286	287	anti-parallel

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There are 5 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	346	349	first strand
Strand 2	E	355	359	anti-parallel
Strand 3	E	406	412	anti-parallel
Strand 4	E	394	400	anti-parallel
Strand 5	E	372	378	anti-parallel

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There are 6 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	105	108	first strand
Strand 2	F	27	30	parallel
Strand 3	F	2	9	parallel
Strand 4	F	132	140	parallel
Strand 5	F	123	127	anti-parallel
Strand 6	F	112	114	anti-parallel

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There are 5 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	105	108	first strand
Strand 2	F	27	30	parallel
Strand 3	F	2	9	parallel
Strand 4	F	132	140	parallel
Strand 5	F	300	302	parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	144	146	first strand
Strand 2	F	266	268	anti-parallel

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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	228	230	first strand
Strand 2	F	197	201	parallel
Strand 3	F	174	178	parallel
Strand 4	F	259	262	parallel

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There are 3 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	235	241	first strand
Strand 2	F	244	249	anti-parallel
Strand 3	F	254	257	anti-parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	282	283	first strand
Strand 2	F	286	287	anti-parallel

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There are 5 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	346	349	first strand
Strand 2	F	355	359	anti-parallel
Strand 3	F	406	412	anti-parallel
Strand 4	F	394	400	anti-parallel
Strand 5	F	372	378	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8RX5

Analysis of interatomic Contacts of Structural Units in PDB entry:
8RX5