Analysis of interatomic Contacts of Structural Units in PDB entry:
8RXK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8RXK entry

There are 5 chains in PDB entry 8RXK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 MET 1HIS 500
D
 MET 1HIS 500
E
 MET 1HIS 500
Y
 T 8 T 31
Z
 A 10 A 33
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 70 helices in PDB entry 8RXK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
39 44Right-handed alpha
Helix 2
AA2
C
44 55Right-handed alpha
Helix 3
AA3
C
81 93Right-handed alpha
Helix 4
AA4
C
97 102Right-handed 310
Helix 5
AA5
C
122 132Right-handed alpha
Helix 6
AA6
C
142 147Right-handed alpha
Helix 7
AA7
C
159 170Right-handed alpha
Helix 8
AA8
C
190 194Right-handed 310
Helix 9
AA9
C
197 205Right-handed alpha
Helix 10
AB1
C
223 235Right-handed alpha
Helix 11
AB2
C
239 254Right-handed alpha
Helix 12
AB3
C
275 280Right-handed alpha
Helix 13
AB4
C
289 294Right-handed alpha
Helix 14
AB5
C
308 315Right-handed alpha
Helix 15
AB6
C
315 321Right-handed alpha
Helix 16
AB7
C
366 371Right-handed alpha
Helix 17
AB8
C
375 382Right-handed alpha
Helix 18
AB9
C
392 398Right-handed alpha
Helix 19
AC1
C
406 422Right-handed alpha
Helix 20
AC2
C
444 458Right-handed alpha
Helix 21
AC3
C
461 466Right-handed alpha
Helix 22
AC4
C
468 479Right-handed alpha
Helix 23
AC5
C
487 494Right-handed alpha
Helix 24
AC6
D
43 56Right-handed alpha
Helix 25
AC7
D
81 93Right-handed alpha
Helix 26
AC8
D
97 101Right-handed 310
Helix 27
AC9
D
122 132Right-handed alpha
Helix 28
AD1
D
142 148Right-handed alpha
Helix 29
AD2
D
159 169Right-handed alpha
Helix 30
AD3
D
190 194Right-handed 310
Helix 31
AD4
D
198 211Right-handed alpha
Helix 32
AD5
D
223 232Right-handed alpha
Helix 33
AD6
D
239 252Right-handed alpha
Helix 34
AD7
D
275 280Right-handed alpha
Helix 35
AD8
D
289 294Right-handed alpha
Helix 36
AD9
D
303 307Right-handed 310
Helix 37
AE1
D
308 315Right-handed alpha
Helix 38
AE2
D
315 322Right-handed alpha
Helix 39
AE3
D
365 374Right-handed alpha
Helix 40
AE4
D
375 380Right-handed alpha
Helix 41
AE5
D
392 398Right-handed alpha
Helix 42
AE6
D
406 425Right-handed alpha
Helix 43
AE7
D
428 432Right-handed 310
Helix 44
AE8
D
433 441Right-handed alpha
Helix 45
AE9
D
444 458Right-handed alpha
Helix 46
AF1
D
461 479Right-handed alpha
Helix 47
AF2
D
485 495Right-handed alpha
Helix 48
AF3
E
39 44Right-handed alpha
Helix 49
AF4
E
44 56Right-handed alpha
Helix 50
AF5
E
81 93Right-handed alpha
Helix 51
AF6
E
122 132Right-handed alpha
Helix 52
AF7
E
142 147Right-handed alpha
Helix 53
AF8
E
148 150Right-handed 310
Helix 54
AF9
E
159 170Right-handed alpha
Helix 55
AG1
E
190 194Right-handed 310
Helix 56
AG2
E
198 211Right-handed alpha
Helix 57
AG3
E
224 232Right-handed alpha
Helix 58
AG4
E
239 254Right-handed alpha
Helix 59
AG5
E
289 294Right-handed alpha
Helix 60
AG6
E
310 315Right-handed alpha
Helix 61
AG7
E
315 322Right-handed alpha
Helix 62
AG8
E
365 373Right-handed alpha
Helix 63
AG9
E
375 380Right-handed alpha
Helix 64
AH1
E
393 397Right-handed 310
Helix 65
AH2
E
406 425Right-handed alpha
Helix 66
AH3
E
428 432Right-handed 310
Helix 67
AH4
E
435 440Right-handed alpha
Helix 68
AH5
E
445 458Right-handed alpha
Helix 69
AH6
E
461 479Right-handed alpha
Helix 70
AH7
E
485 493Right-handed alpha
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There are 15 sheets in PDB entry 8RXK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
3 12first strand
Strand 2
C
15 26anti-parallel
Strand 3
C
64 68anti-parallel
Strand 4
C
32 35parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
104 106first strand
Strand 2
C
135 139parallel
Strand 3
C
154 157parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
109 110first strand
Strand 2
C
116 117anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
267 268first strand
Strand 2
C
298 302parallel
Strand 3
C
340 345parallel
Strand 4
C
214 218parallel
Strand 5
C
384 388parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
326 327first strand
Strand 2
C
332 333anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
3 12first strand
Strand 2
D
15 25anti-parallel
Strand 3
D
64 69anti-parallel
Strand 4
D
31 33parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
104 106first strand
Strand 2
D
135 139parallel
Strand 3
D
154 157parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
109 110first strand
Strand 2
D
116 117anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
267 268first strand
Strand 2
D
298 301parallel
Strand 3
D
340 345parallel
Strand 4
D
214 218parallel
Strand 5
D
384 388parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
326 327first strand
Strand 2
D
332 333anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
3 12first strand
Strand 2
E
15 26anti-parallel
Strand 3
E
64 69anti-parallel
Strand 4
E
31 35parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
105 106first strand
Strand 2
E
136 139parallel
Strand 3
E
154 157parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
109 110first strand
Strand 2
E
116 117anti-parallel
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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
267 268first strand
Strand 2
E
298 301parallel
Strand 3
E
342 345parallel
Strand 4
E
214 217parallel
Strand 5
E
384 387parallel
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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
323 327first strand
Strand 2
E
332 336anti-parallel
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