Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 8RXO entry
There are 2 chains in PDB entry 8RXO
(CSU analysis of residue contacts immediately below table)
| Chain ID |
Initial residue | Terminal residue |
A
|
LEU 59 | SER 148 |
B
|
LEU 49 | ALA 152 |
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There are 11
helices in PDB entry 8RXO. Click on helix of interest for
CSU analysis.
Helix number
| Helix ID | Chain ID |
Initial residue | Terminal residue |
Helix class |
| Helix 1 |
AA1 | A
| 61 |
80 | Right-handed alpha |
| Helix 2 |
AA2 | A
| 85 |
102 | Right-handed alpha |
| Helix 3 |
AA3 | A
| 104 |
115 | Right-handed alpha |
| Helix 4 |
AA4 | A
| 115 |
122 | Right-handed alpha |
| Helix 5 |
AA5 | A
| 131 |
148 | Right-handed alpha |
| Helix 6 |
AA6 | B
| 50 |
54 | Right-handed alpha |
| Helix 7 |
AA7 | B
| 59 |
80 | Right-handed alpha |
| Helix 8 |
AA8 | B
| 85 |
102 | Right-handed alpha |
| Helix 9 |
AA9 | B
| 104 |
115 | Right-handed alpha |
| Helix 10 |
AB1 | B
| 115 |
122 | Right-handed alpha |
| Helix 11 |
AB2 | B
| 131 |
152 | Right-handed alpha |
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There are no sheets in PDB entry
8RXO
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il