Analysis of interatomic Contacts of Structural Units in PDB entry:
8RXT

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8RXT entry

There are 6 chains in PDB entry 8RXT (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	HIS 500
B	MET 1	HIS 500
C	MET 1	HIS 500
D	MET 1	HIS 500
E	MET 1	HIS 500
F	MET 1	HIS 500

There are156 helices in PDB entry 8RXT. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	39	44	Right-handed alpha
Helix 2	AA2	A	44	56	Right-handed alpha
Helix 3	AA3	A	81	93	Right-handed alpha
Helix 4	AA4	A	97	102	Right-handed 310
Helix 5	AA5	A	122	132	Right-handed alpha
Helix 6	AA6	A	142	147	Right-handed alpha
Helix 7	AA7	A	159	170	Right-handed alpha
Helix 8	AA8	A	190	194	Right-handed 310
Helix 9	AA9	A	197	211	Right-handed alpha
Helix 10	AB1	A	223	232	Right-handed alpha
Helix 11	AB2	A	233	235	Right-handed 310
Helix 12	AB3	A	239	254	Right-handed alpha
Helix 13	AB4	A	275	280	Right-handed alpha
Helix 14	AB5	A	289	294	Right-handed alpha
Helix 15	AB6	A	303	307	Right-handed 310
Helix 16	AB7	A	308	315	Right-handed alpha
Helix 17	AB8	A	315	322	Right-handed alpha
Helix 18	AB9	A	365	373	Right-handed alpha
Helix 19	AC1	A	375	380	Right-handed alpha
Helix 20	AC2	A	392	397	Right-handed alpha
Helix 21	AC3	A	406	425	Right-handed alpha
Helix 22	AC4	A	428	432	Right-handed 310
Helix 23	AC5	A	433	441	Right-handed alpha
Helix 24	AC6	A	444	458	Right-handed alpha
Helix 25	AC7	A	461	479	Right-handed alpha
Helix 26	AC8	A	485	496	Right-handed alpha
Helix 27	AC9	B	39	44	Right-handed alpha
Helix 28	AD1	B	44	56	Right-handed alpha
Helix 29	AD2	B	81	93	Right-handed alpha
Helix 30	AD3	B	97	102	Right-handed 310
Helix 31	AD4	B	122	132	Right-handed alpha
Helix 32	AD5	B	142	147	Right-handed alpha
Helix 33	AD6	B	159	170	Right-handed alpha
Helix 34	AD7	B	198	211	Right-handed alpha
Helix 35	AD8	B	223	231	Right-handed alpha
Helix 36	AD9	B	232	235	Right-handed 310
Helix 37	AE1	B	239	253	Right-handed alpha
Helix 38	AE2	B	275	280	Right-handed alpha
Helix 39	AE3	B	289	294	Right-handed alpha
Helix 40	AE4	B	303	307	Right-handed 310
Helix 41	AE5	B	308	322	Right-handed alpha
Helix 42	AE6	B	365	373	Right-handed alpha
Helix 43	AE7	B	375	379	Right-handed 310
Helix 44	AE8	B	392	398	Right-handed alpha
Helix 45	AE9	B	399	403	Right-handed 310
Helix 46	AF1	B	406	425	Right-handed alpha
Helix 47	AF2	B	428	432	Right-handed 310
Helix 48	AF3	B	433	441	Right-handed alpha
Helix 49	AF4	B	444	458	Right-handed alpha
Helix 50	AF5	B	461	479	Right-handed alpha
Helix 51	AF6	B	485	495	Right-handed alpha
Helix 52	AF7	C	39	44	Right-handed alpha
Helix 53	AF8	C	44	56	Right-handed alpha
Helix 54	AF9	C	81	93	Right-handed alpha
Helix 55	AG1	C	97	102	Right-handed alpha
Helix 56	AG2	C	122	132	Right-handed alpha
Helix 57	AG3	C	142	148	Right-handed alpha
Helix 58	AG4	C	159	169	Right-handed alpha
Helix 59	AG5	C	184	189	Right-handed 310
Helix 60	AG6	C	197	210	Right-handed alpha
Helix 61	AG7	C	224	232	Right-handed alpha
Helix 62	AG8	C	239	252	Right-handed alpha
Helix 63	AG9	C	275	280	Right-handed alpha
Helix 64	AH1	C	289	294	Right-handed alpha
Helix 65	AH2	C	303	307	Right-handed 310
Helix 66	AH3	C	308	322	Right-handed alpha
Helix 67	AH4	C	365	372	Right-handed alpha
Helix 68	AH5	C	375	382	Right-handed alpha
Helix 69	AH6	C	391	396	Right-handed alpha
Helix 70	AH7	C	406	425	Right-handed alpha
Helix 71	AH8	C	428	432	Right-handed 310
Helix 72	AH9	C	433	441	Right-handed alpha
Helix 73	AI1	C	444	458	Right-handed alpha
Helix 74	AI2	C	461	478	Right-handed alpha
Helix 75	AI3	C	485	493	Right-handed alpha
Helix 76	AI4	C	494	496	Right-handed 310
Helix 77	AI5	D	40	56	Right-handed alpha
Helix 78	AI6	D	81	93	Right-handed alpha
Helix 79	AI7	D	97	102	Right-handed 310
Helix 80	AI8	D	122	132	Right-handed alpha
Helix 81	AI9	D	142	147	Right-handed alpha
Helix 82	AJ1	D	148	150	Right-handed 310
Helix 83	AJ2	D	159	170	Right-handed alpha
Helix 84	AJ3	D	190	194	Right-handed 310
Helix 85	AJ4	D	197	211	Right-handed alpha
Helix 86	AJ5	D	223	232	Right-handed alpha
Helix 87	AJ6	D	233	235	Right-handed 310
Helix 88	AJ7	D	239	254	Right-handed alpha
Helix 89	AJ8	D	258	262	Right-handed 310
Helix 90	AJ9	D	275	280	Right-handed alpha
Helix 91	AK1	D	289	294	Right-handed alpha
Helix 92	AK2	D	303	307	Right-handed 310
Helix 93	AK3	D	308	315	Right-handed alpha
Helix 94	AK4	D	315	322	Right-handed alpha
Helix 95	AK5	D	365	373	Right-handed alpha
Helix 96	AK6	D	375	380	Right-handed alpha
Helix 97	AK7	D	392	398	Right-handed alpha
Helix 98	AK8	D	405	424	Right-handed alpha
Helix 99	AK9	D	428	432	Right-handed 310
Helix 100	AL1	D	433	441	Right-handed alpha
Helix 101	AL2	D	444	458	Right-handed alpha
Helix 102	AL3	D	461	479	Right-handed alpha
Helix 103	AL4	D	485	493	Right-handed alpha
Helix 104	AL5	D	494	496	Right-handed 310
Helix 105	AL6	E	39	44	Right-handed alpha
Helix 106	AL7	E	44	56	Right-handed alpha
Helix 107	AL8	E	78	80	Right-handed 310
Helix 108	AL9	E	81	93	Right-handed alpha
Helix 109	AM1	E	97	101	Right-handed 310
Helix 110	AM2	E	121	132	Right-handed alpha
Helix 111	AM3	E	142	147	Right-handed alpha
Helix 112	AM4	E	148	150	Right-handed 310
Helix 113	AM5	E	159	170	Right-handed alpha
Helix 114	AM6	E	198	210	Right-handed alpha
Helix 115	AM7	E	223	232	Right-handed alpha
Helix 116	AM8	E	239	254	Right-handed alpha
Helix 117	AM9	E	275	280	Right-handed alpha
Helix 118	AN1	E	289	294	Right-handed alpha
Helix 119	AN2	E	303	307	Right-handed 310
Helix 120	AN3	E	308	322	Right-handed alpha
Helix 121	AN4	E	365	371	Right-handed alpha
Helix 122	AN5	E	372	374	Right-handed 310
Helix 123	AN6	E	375	380	Right-handed alpha
Helix 124	AN7	E	392	398	Right-handed alpha
Helix 125	AN8	E	406	425	Right-handed alpha
Helix 126	AN9	E	433	441	Right-handed alpha
Helix 127	AO1	E	444	458	Right-handed alpha
Helix 128	AO2	E	461	479	Right-handed alpha
Helix 129	AO3	E	485	494	Right-handed alpha
Helix 130	AO4	F	39	44	Right-handed alpha
Helix 131	AO5	F	44	56	Right-handed alpha
Helix 132	AO6	F	81	93	Right-handed alpha
Helix 133	AO7	F	97	101	Right-handed 310
Helix 134	AO8	F	122	132	Right-handed alpha
Helix 135	AO9	F	142	147	Right-handed alpha
Helix 136	AP1	F	159	170	Right-handed alpha
Helix 137	AP2	F	190	194	Right-handed 310
Helix 138	AP3	F	198	211	Right-handed alpha
Helix 139	AP4	F	224	229	Right-handed alpha
Helix 140	AP5	F	230	235	Right-handed 310
Helix 141	AP6	F	239	254	Right-handed alpha
Helix 142	AP7	F	275	280	Right-handed alpha
Helix 143	AP8	F	289	294	Right-handed alpha
Helix 144	AP9	F	303	307	Right-handed 310
Helix 145	AQ1	F	308	315	Right-handed alpha
Helix 146	AQ2	F	315	322	Right-handed alpha
Helix 147	AQ3	F	365	371	Right-handed alpha
Helix 148	AQ4	F	372	374	Right-handed 310
Helix 149	AQ5	F	375	380	Right-handed alpha
Helix 150	AQ6	F	392	397	Right-handed alpha
Helix 151	AQ7	F	406	425	Right-handed alpha
Helix 152	AQ8	F	428	432	Right-handed 310
Helix 153	AQ9	F	433	441	Right-handed alpha
Helix 154	AR1	F	444	458	Right-handed alpha
Helix 155	AR2	F	461	479	Right-handed alpha
Helix 156	AR3	F	485	495	Right-handed alpha

There are 28 sheets in PDB entry 8RXT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3	9	first strand
Strand 2	A	18	26	anti-parallel
Strand 3	A	64	70	anti-parallel
Strand 4	A	31	35	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	104	106	first strand
Strand 2	A	135	139	parallel
Strand 3	A	154	157	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	109	110	first strand
Strand 2	A	116	117	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	267	268	first strand
Strand 2	A	298	301	parallel
Strand 3	A	340	345	parallel
Strand 4	A	214	218	parallel
Strand 5	A	384	388	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	323	327	first strand
Strand 2	A	332	336	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3	12	first strand
Strand 2	B	15	25	anti-parallel
Strand 3	B	64	70	anti-parallel
Strand 4	B	31	35	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	104	107	first strand
Strand 2	B	135	139	parallel
Strand 3	B	156	157	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	109	110	first strand
Strand 2	B	116	117	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	267	268	first strand
Strand 2	B	297	301	parallel
Strand 3	B	339	345	parallel
Strand 4	B	214	217	parallel
Strand 5	B	384	387	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	3	10	first strand
Strand 2	C	17	26	anti-parallel
Strand 3	C	64	70	anti-parallel
Strand 4	C	32	35	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	104	106	first strand
Strand 2	C	135	139	parallel
Strand 3	C	154	157	parallel
Strand 4	C	174	175	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	109	110	first strand
Strand 2	C	116	117	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	267	268	first strand
Strand 2	C	298	301	parallel
Strand 3	C	340	345	parallel
Strand 4	C	214	218	parallel
Strand 5	C	384	388	parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	3	11	first strand
Strand 2	D	16	26	anti-parallel
Strand 3	D	64	69	anti-parallel
Strand 4	D	32	35	parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	104	106	first strand
Strand 2	D	135	139	parallel
Strand 3	D	154	157	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	109	110	first strand
Strand 2	D	116	117	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	267	268	first strand
Strand 2	D	297	301	parallel
Strand 3	D	339	345	parallel
Strand 4	D	214	218	parallel
Strand 5	D	384	388	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	326	327	first strand
Strand 2	D	332	333	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	3	9	first strand
Strand 2	E	18	26	anti-parallel
Strand 3	E	64	69	anti-parallel
Strand 4	E	32	35	parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	104	107	first strand
Strand 2	E	135	139	parallel
Strand 3	E	154	157	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	109	110	first strand
Strand 2	E	116	117	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	267	268	first strand
Strand 2	E	298	301	parallel
Strand 3	E	340	345	parallel
Strand 4	E	214	217	parallel
Strand 5	E	384	387	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	323	325	first strand
Strand 2	E	334	336	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	3	9	first strand
Strand 2	F	18	26	anti-parallel
Strand 3	F	64	70	anti-parallel
Strand 4	F	32	35	parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	104	107	first strand
Strand 2	F	135	139	parallel
Strand 3	F	154	157	parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	109	110	first strand
Strand 2	F	116	117	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	267	268	first strand
Strand 2	F	297	301	parallel
Strand 3	F	339	345	parallel
Strand 4	F	214	217	parallel
Strand 5	F	384	387	parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	323	326	first strand
Strand 2	F	333	336	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8RXT

Analysis of interatomic Contacts of Structural Units in PDB entry:
8RXT