Analysis of interatomic Contacts of Structural Units in PDB entry:
8RZ6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8RZ6 entry

There are 2 chains in PDB entry 8RZ6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 80	LEU 525
B	ILE 80	LEU 525

There are 32 helices in PDB entry 8RZ6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	98	108	Right-handed alpha
Helix 2	AA2	A	130	145	Right-handed alpha
Helix 3	AA3	A	146	148	Right-handed 310
Helix 4	AA4	A	179	192	Right-handed alpha
Helix 5	AA5	A	223	226	Right-handed 310
Helix 6	AA6	A	227	228	Right-handed 310
Helix 7	AA7	A	229	247	Right-handed alpha
Helix 8	AA8	A	259	271	Right-handed alpha
Helix 9	AA9	A	272	287	Right-handed alpha
Helix 10	AB1	A	318	332	Right-handed alpha
Helix 11	AB2	A	335	353	Right-handed alpha
Helix 12	AB3	A	368	372	Right-handed 310
Helix 13	AB4	A	393	411	Right-handed alpha
Helix 14	AB5	A	415	424	Right-handed alpha
Helix 15	AB6	A	493	514	Right-handed alpha
Helix 16	AB7	A	518	522	Right-handed 310
Helix 17	AB8	B	98	108	Right-handed alpha
Helix 18	AB9	B	130	145	Right-handed alpha
Helix 19	AC1	B	146	148	Right-handed 310
Helix 20	AC2	B	179	192	Right-handed alpha
Helix 21	AC3	B	223	226	Right-handed 310
Helix 22	AC4	B	227	228	Right-handed 310
Helix 23	AC5	B	229	247	Right-handed alpha
Helix 24	AC6	B	259	271	Right-handed alpha
Helix 25	AC7	B	272	287	Right-handed alpha
Helix 26	AC8	B	318	332	Right-handed alpha
Helix 27	AC9	B	335	353	Right-handed alpha
Helix 28	AD1	B	368	372	Right-handed 310
Helix 29	AD2	B	393	411	Right-handed alpha
Helix 30	AD3	B	415	424	Right-handed alpha
Helix 31	AD4	B	493	514	Right-handed alpha
Helix 32	AD5	B	518	522	Right-handed 310

There are 10 sheets in PDB entry 8RZ6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	95	96	first strand
Strand 2	A	159	163	anti-parallel
Strand 3	A	150	154	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	171	176	first strand
Strand 2	A	203	209	parallel
Strand 3	A	215	221	anti-parallel
Strand 4	A	121	125	anti-parallel
Strand 5	A	459	460	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	310	314	first strand
Strand 2	A	480	488	anti-parallel
Strand 3	A	470	477	anti-parallel
Strand 4	A	437	443	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	356	364	first strand
Strand 2	A	379	387	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	448	451	first strand
Strand 2	A	454	457	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	95	96	first strand
Strand 2	B	159	163	anti-parallel
Strand 3	B	150	154	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	171	176	first strand
Strand 2	B	203	209	parallel
Strand 3	B	215	221	anti-parallel
Strand 4	B	121	125	anti-parallel
Strand 5	B	459	460	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	310	314	first strand
Strand 2	B	480	488	anti-parallel
Strand 3	B	470	477	anti-parallel
Strand 4	B	437	443	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	356	364	first strand
Strand 2	B	379	387	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	448	451	first strand
Strand 2	B	454	457	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8RZ6

Analysis of interatomic Contacts of Structural Units in PDB entry:
8RZ6