Analysis of interatomic Contacts of Structural Units in PDB entry:
8RZ7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8RZ7 entry

There are 4 chains in PDB entry 8RZ7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 30	ILE 916
B	ILE 228	GLU 1125
C	T 22	A 47
D	T 20	A 39

There are 68 helices in PDB entry 8RZ7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	47	55	Right-handed alpha
Helix 2	AA2	A	81	94	Right-handed alpha
Helix 3	AA3	A	184	195	Right-handed alpha
Helix 4	AA4	A	208	220	Right-handed alpha
Helix 5	AA5	A	228	233	Right-handed alpha
Helix 6	AA6	A	236	245	Right-handed alpha
Helix 7	AA7	A	258	262	Right-handed 310
Helix 8	AA8	A	263	278	Right-handed alpha
Helix 9	AA9	A	282	286	Right-handed 310
Helix 10	AB1	A	303	310	Right-handed alpha
Helix 11	AB2	A	325	330	Right-handed alpha
Helix 12	AB3	A	335	348	Right-handed alpha
Helix 13	AB4	A	352	369	Right-handed alpha
Helix 14	AB5	A	370	379	Right-handed alpha
Helix 15	AB6	A	380	384	Right-handed 310
Helix 16	AB7	A	386	396	Right-handed alpha
Helix 17	AB8	A	400	425	Right-handed alpha
Helix 18	AB9	A	429	447	Right-handed alpha
Helix 19	AC1	A	447	458	Right-handed alpha
Helix 20	AC2	A	459	464	Right-handed alpha
Helix 21	AC3	A	471	474	Right-handed 310
Helix 22	AC4	A	475	504	Right-handed alpha
Helix 23	AC5	A	529	534	Right-handed alpha
Helix 24	AC6	A	553	572	Right-handed alpha
Helix 25	AC7	A	574	586	Right-handed alpha
Helix 26	AC8	A	589	614	Right-handed alpha
Helix 27	AC9	A	674	690	Right-handed alpha
Helix 28	AD1	A	723	738	Right-handed alpha
Helix 29	AD2	A	755	773	Right-handed alpha
Helix 30	AD3	A	784	793	Right-handed 310
Helix 31	AD4	A	827	832	Right-handed alpha
Helix 32	AD5	A	837	852	Right-handed alpha
Helix 33	AD6	A	879	890	Right-handed alpha
Helix 34	AD7	A	909	916	Right-handed alpha
Helix 35	AD8	B	230	243	Right-handed alpha
Helix 36	AD9	B	260	271	Right-handed alpha
Helix 37	AE1	B	289	300	Right-handed alpha
Helix 38	AE2	B	411	422	Right-handed alpha
Helix 39	AE3	B	433	446	Right-handed alpha
Helix 40	AE4	B	448	452	Right-handed 310
Helix 41	AE5	B	459	463	Right-handed 310
Helix 42	AE6	B	464	476	Right-handed alpha
Helix 43	AE7	B	491	495	Right-handed 310
Helix 44	AE8	B	496	513	Right-handed alpha
Helix 45	AE9	B	516	520	Right-handed 310
Helix 46	AF1	B	521	525	Right-handed 310
Helix 47	AF2	B	538	545	Right-handed alpha
Helix 48	AF3	B	559	565	Right-handed alpha
Helix 49	AF4	B	569	582	Right-handed alpha
Helix 50	AF5	B	586	602	Right-handed alpha
Helix 51	AF6	B	606	615	Right-handed alpha
Helix 52	AF7	B	620	630	Right-handed alpha
Helix 53	AF8	B	634	660	Right-handed alpha
Helix 54	AF9	B	665	680	Right-handed alpha
Helix 55	AG1	B	681	689	Right-handed alpha
Helix 56	AG2	B	691	697	Right-handed alpha
Helix 57	AG3	B	709	738	Right-handed alpha
Helix 58	AG4	B	782	817	Right-handed alpha
Helix 59	AG5	B	817	843	Right-handed alpha
Helix 60	AG6	B	864	871	Right-handed alpha
Helix 61	AG7	B	901	919	Right-handed alpha
Helix 62	AG8	B	951	966	Right-handed alpha
Helix 63	AG9	B	982	1000	Right-handed alpha
Helix 64	AH1	B	1011	1016	Right-handed alpha
Helix 65	AH2	B	1017	1019	Right-handed 310
Helix 66	AH3	B	1067	1076	Right-handed alpha
Helix 67	AH4	B	1079	1112	Right-handed alpha
Helix 68	AH5	B	1119	1125	Right-handed alpha

There are 14 sheets in PDB entry 8RZ7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	77	80	first strand
Strand 2	A	43	46	anti-parallel
Strand 3	A	33	37	anti-parallel
Strand 4	A	99	103	parallel
Strand 5	A	122	123	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	147	149	first strand
Strand 2	A	198	200	parallel
Strand 3	A	223	225	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	151	152	first strand
Strand 2	A	161	162	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	172	175	first strand
Strand 2	A	290	293	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	301	302	first strand
Strand 2	A	707	711	parallel
Strand 3	A	744	748	parallel
Strand 4	A	777	781	parallel
Strand 5	A	664	668	parallel
Strand 6	A	797	801	parallel
Strand 7	A	818	819	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	514	516	first strand
Strand 2	A	520	526	anti-parallel
Strand 3	A	548	551	anti-parallel
Strand 4	A	544	545	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	623	625	first strand
Strand 2	A	699	703	parallel
Strand 3	A	632	637	anti-parallel
Strand 4	A	653	655	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	804	806	first strand
Strand 2	A	811	813	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	282	286	first strand
Strand 2	B	255	259	anti-parallel
Strand 3	B	247	252	anti-parallel
Strand 4	B	304	309	parallel
Strand 5	B	328	334	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	371	373	first strand
Strand 2	B	386	390	anti-parallel
Strand 3	B	401	407	anti-parallel
Strand 4	B	526	527	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	425	429	first strand
Strand 2	B	454	458	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	769	773	first strand
Strand 2	B	778	781	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	880	885	first strand
Strand 2	B	856	862	anti-parallel
Strand 3	B	926	927	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	935	937	first strand
Strand 2	B	971	975	parallel
Strand 3	B	1004	1008	parallel
Strand 4	B	891	894	parallel
Strand 5	B	1025	1030	parallel
Strand 6	B	1059	1061	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8RZ7

Analysis of interatomic Contacts of Structural Units in PDB entry:
8RZ7