Analysis of interatomic Contacts of Structural Units in PDB entry:
8RZ8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8RZ8 entry

There are 2 chains in PDB entry 8RZ8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 146TYR 856
B
 MET 532ALA 1108
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 51 helices in PDB entry 8RZ8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
186 195Right-handed alpha
Helix 2
AA2
A
210 220Right-handed alpha
Helix 3
AA3
A
228 232Right-handed 310
Helix 4
AA4
A
236 244Right-handed alpha
Helix 5
AA5
A
266 275Right-handed alpha
Helix 6
AA6
A
282 286Right-handed 310
Helix 7
AA7
A
303 310Right-handed alpha
Helix 8
AA8
A
325 331Right-handed alpha
Helix 9
AA9
A
335 348Right-handed alpha
Helix 10
AB1
A
352 369Right-handed alpha
Helix 11
AB2
A
369 379Right-handed alpha
Helix 12
AB3
A
386 396Right-handed alpha
Helix 13
AB4
A
400 413Right-handed alpha
Helix 14
AB5
A
413 424Right-handed alpha
Helix 15
AB6
A
429 447Right-handed alpha
Helix 16
AB7
A
447 457Right-handed alpha
Helix 17
AB8
A
475 499Right-handed alpha
Helix 18
AB9
A
553 587Right-handed alpha
Helix 19
AC1
A
588 613Right-handed alpha
Helix 20
AC2
A
674 692Right-handed alpha
Helix 21
AC3
A
723 736Right-handed alpha
Helix 22
AC4
A
755 773Right-handed alpha
Helix 23
AC5
A
784 788Right-handed 310
Helix 24
AC6
A
789 794Right-handed alpha
Helix 25
AC7
A
826 834Right-handed alpha
Helix 26
AC8
A
837 851Right-handed alpha
Helix 27
AC9
B
538 546Right-handed alpha
Helix 28
AD1
B
559 565Right-handed alpha
Helix 29
AD2
B
570 582Right-handed alpha
Helix 30
AD3
B
586 603Right-handed alpha
Helix 31
AD4
B
606 618Right-handed alpha
Helix 32
AD5
B
621 631Right-handed alpha
Helix 33
AD6
B
634 654Right-handed alpha
Helix 34
AD7
B
655 663Right-handed alpha
Helix 35
AD8
B
665 673Right-handed alpha
Helix 36
AD9
B
674 679Right-handed alpha
Helix 37
AE1
B
680 682Right-handed 310
Helix 38
AE2
B
683 688Right-handed alpha
Helix 39
AE3
B
690 697Right-handed alpha
Helix 40
AE4
B
709 729Right-handed alpha
Helix 41
AE5
B
729 737Right-handed alpha
Helix 42
AE6
B
782 815Right-handed alpha
Helix 43
AE7
B
817 843Right-handed alpha
Helix 44
AE8
B
864 871Right-handed alpha
Helix 45
AE9
B
901 919Right-handed alpha
Helix 46
AF1
B
950 965Right-handed alpha
Helix 47
AF2
B
982 1000Right-handed alpha
Helix 48
AF3
B
1011 1016Right-handed alpha
Helix 49
AF4
B
1017 1021Right-handed 310
Helix 50
AF5
B
1068 1076Right-handed alpha
Helix 51
AF6
B
1079 1108Right-handed alpha
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There are 6 sheets in PDB entry 8RZ8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 151first strand
Strand 2
A
162 166anti-parallel
Strand 3
A
173 175anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
653 657first strand
Strand 2
A
632 637anti-parallel
Strand 3
A
699 700anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
707 711first strand
Strand 2
A
743 747parallel
Strand 3
A
777 781parallel
Strand 4
A
664 668parallel
Strand 5
A
797 802parallel
Strand 6
A
817 819anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
756 757first strand
Strand 2
B
777 778anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
880 885first strand
Strand 2
B
856 862anti-parallel
Strand 3
B
926 927anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
935 938first strand
Strand 2
B
971 975parallel
Strand 3
B
1004 1008parallel
Strand 4
B
891 895parallel
Strand 5
B
1025 1030parallel
Strand 6
B
1059 1061anti-parallel
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