Analysis of interatomic Contacts of Structural Units in PDB entry:
8RZ9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8RZ9 entry

There are 2 chains in PDB entry 8RZ9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 298TYR 856
B
 MET 532ARG 1103
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 8RZ9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
303 311Right-handed alpha
Helix 2
AA2
A
325 331Right-handed alpha
Helix 3
AA3
A
335 348Right-handed alpha
Helix 4
AA4
A
352 369Right-handed alpha
Helix 5
AA5
A
369 378Right-handed alpha
Helix 6
AA6
A
386 396Right-handed alpha
Helix 7
AA7
A
400 424Right-handed alpha
Helix 8
AA8
A
429 457Right-handed alpha
Helix 9
AA9
A
475 503Right-handed alpha
Helix 10
AB1
A
553 586Right-handed alpha
Helix 11
AB2
A
588 615Right-handed alpha
Helix 12
AB3
A
674 692Right-handed alpha
Helix 13
AB4
A
723 739Right-handed alpha
Helix 14
AB5
A
755 773Right-handed alpha
Helix 15
AB6
A
786 788Right-handed 310
Helix 16
AB7
A
789 794Right-handed alpha
Helix 17
AB8
A
826 834Right-handed alpha
Helix 18
AB9
A
837 851Right-handed alpha
Helix 19
AC1
A
852 855Right-handed 310
Helix 20
AC2
B
538 545Right-handed alpha
Helix 21
AC3
B
559 565Right-handed alpha
Helix 22
AC4
B
569 582Right-handed alpha
Helix 23
AC5
B
586 602Right-handed alpha
Helix 24
AC6
B
606 616Right-handed alpha
Helix 25
AC7
B
620 630Right-handed alpha
Helix 26
AC8
B
634 655Right-handed alpha
Helix 27
AC9
B
655 660Right-handed alpha
Helix 28
AD1
B
665 679Right-handed alpha
Helix 29
AD2
B
681 689Right-handed alpha
Helix 30
AD3
B
690 697Right-handed alpha
Helix 31
AD4
B
705 708Right-handed 310
Helix 32
AD5
B
709 737Right-handed alpha
Helix 33
AD6
B
782 816Right-handed alpha
Helix 34
AD7
B
817 844Right-handed alpha
Helix 35
AD8
B
864 872Right-handed alpha
Helix 36
AD9
B
897 900Right-handed 310
Helix 37
AE1
B
901 919Right-handed alpha
Helix 38
AE2
B
950 966Right-handed alpha
Helix 39
AE3
B
982 1000Right-handed alpha
Helix 40
AE4
B
1011 1016Right-handed alpha
Helix 41
AE5
B
1016 1021Right-handed alpha
Helix 42
AE6
B
1068 1076Right-handed alpha
Helix 43
AE7
B
1079 1103Right-handed alpha
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There are 6 sheets in PDB entry 8RZ9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
512 513first strand
Strand 2
A
523 524anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
653 656first strand
Strand 2
A
633 637anti-parallel
Strand 3
A
699 701anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
708 711first strand
Strand 2
A
744 747parallel
Strand 3
A
777 780parallel
Strand 4
A
664 668parallel
Strand 5
A
797 805parallel
Strand 6
A
812 819anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
769 772first strand
Strand 2
B
779 781anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
880 885first strand
Strand 2
B
856 862anti-parallel
Strand 3
B
926 929anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
935 938first strand
Strand 2
B
971 975parallel
Strand 3
B
1004 1008parallel
Strand 4
B
891 895parallel
Strand 5
B
1025 1034parallel
Strand 6
B
1053 1061anti-parallel
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