Analysis of interatomic Contacts of Structural Units in PDB entry:
8RZK

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8RZK entry

There are 2 chains in PDB entry 8RZK (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 35	ASP 693
B	PRO 35	GLU 631

There are 85 helices in PDB entry 8RZK. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	92	94	Right-handed 310
Helix 2	AA2	A	193	204	Right-handed alpha
Helix 3	AA3	A	205	208	Right-handed 310
Helix 4	AA4	A	256	260	Right-handed 310
Helix 5	AA5	A	299	314	Right-handed alpha
Helix 6	AA6	A	319	327	Right-handed alpha
Helix 7	AA7	A	328	333	Right-handed 310
Helix 8	AA8	A	357	371	Right-handed alpha
Helix 9	AA9	A	400	415	Right-handed alpha
Helix 10	AB1	A	453	457	Right-handed 310
Helix 11	AB2	A	459	461	Right-handed 310
Helix 12	AB3	A	462	468	Right-handed alpha
Helix 13	AB4	A	470	479	Right-handed alpha
Helix 14	AB5	A	496	509	Right-handed alpha
Helix 15	AB6	A	520	527	Right-handed 310
Helix 16	AB7	A	541	545	Right-handed 310
Helix 17	AB8	A	549	556	Right-handed alpha
Helix 18	AB9	A	577	589	Right-handed alpha
Helix 19	AC1	A	597	599	Right-handed 310
Helix 20	AC2	A	600	623	Right-handed alpha
Helix 21	AC3	A	662	664	Right-handed 310
Helix 22	AC4	B	92	94	Right-handed 310
Helix 23	AC5	B	193	204	Right-handed alpha
Helix 24	AC6	B	205	208	Right-handed 310
Helix 25	AC7	B	256	260	Right-handed 310
Helix 26	AC8	B	299	314	Right-handed alpha
Helix 27	AC9	B	319	327	Right-handed alpha
Helix 28	AD1	B	328	333	Right-handed 310
Helix 29	AD2	B	357	371	Right-handed alpha
Helix 30	AD3	B	401	415	Right-handed alpha
Helix 31	AD4	B	436	440	Right-handed 310
Helix 32	AD5	B	453	457	Right-handed 310
Helix 33	AD6	B	459	461	Right-handed 310
Helix 34	AD7	B	462	469	Right-handed alpha
Helix 35	AD8	B	470	479	Right-handed alpha
Helix 36	AD9	B	496	509	Right-handed alpha
Helix 37	AE1	B	520	527	Right-handed 310
Helix 38	AE2	B	541	545	Right-handed 310
Helix 39	AE3	B	549	556	Right-handed alpha
Helix 40	AE4	B	577	589	Right-handed alpha
Helix 41	AE5	B	597	599	Right-handed 310
Helix 42	AE6	B	600	614	Right-handed alpha
Helix 43	AE7	B	614	623	Right-handed alpha
Helix 44	AE8	B	662	664	Right-handed 310
Helix 45	AE9	C	92	94	Right-handed 310
Helix 46	AF1	C	193	204	Right-handed alpha
Helix 47	AF2	C	205	208	Right-handed 310
Helix 48	AF3	C	256	260	Right-handed 310
Helix 49	AF4	C	299	314	Right-handed alpha
Helix 50	AF5	C	319	327	Right-handed alpha
Helix 51	AF6	C	328	333	Right-handed 310
Helix 52	AF7	C	357	371	Right-handed alpha
Helix 53	AF8	C	400	415	Right-handed alpha
Helix 54	AF9	C	436	440	Right-handed 310
Helix 55	AG1	C	453	457	Right-handed 310
Helix 56	AG2	C	459	468	Right-handed alpha
Helix 57	AG3	C	470	479	Right-handed alpha
Helix 58	AG4	C	496	509	Right-handed alpha
Helix 59	AG5	C	520	527	Right-handed 310
Helix 60	AG6	C	541	545	Right-handed 310
Helix 61	AG7	C	549	556	Right-handed alpha
Helix 62	AG8	C	577	589	Right-handed alpha
Helix 63	AG9	C	597	599	Right-handed 310
Helix 64	AH1	C	600	614	Right-handed alpha
Helix 65	AH2	C	614	623	Right-handed alpha
Helix 66	AH3	D	92	94	Right-handed 310
Helix 67	AH4	D	193	204	Right-handed alpha
Helix 68	AH5	D	205	208	Right-handed 310
Helix 69	AH6	D	256	260	Right-handed 310
Helix 70	AH7	D	299	314	Right-handed alpha
Helix 71	AH8	D	319	327	Right-handed alpha
Helix 72	AH9	D	328	333	Right-handed 310
Helix 73	AI1	D	357	371	Right-handed alpha
Helix 74	AI2	D	400	415	Right-handed alpha
Helix 75	AI3	D	453	457	Right-handed 310
Helix 76	AI4	D	459	469	Right-handed alpha
Helix 77	AI5	D	470	479	Right-handed alpha
Helix 78	AI6	D	496	509	Right-handed alpha
Helix 79	AI7	D	520	527	Right-handed 310
Helix 80	AI8	D	541	545	Right-handed 310
Helix 81	AI9	D	549	556	Right-handed alpha
Helix 82	AJ1	D	577	589	Right-handed alpha
Helix 83	AJ2	D	597	599	Right-handed 310
Helix 84	AJ3	D	600	623	Right-handed alpha
Helix 85	AJ4	D	662	664	Right-handed 310

There are 29 sheets in PDB entry 8RZK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	36	39	first strand
Strand 2	A	43	47	anti-parallel
Strand 3	A	54	58	anti-parallel
Strand 4	A	63	65	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	86	90	first strand
Strand 2	A	76	80	anti-parallel
Strand 3	A	154	158	anti-parallel
Strand 4	A	272	280	anti-parallel
Strand 5	A	166	167	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	86	90	first strand
Strand 2	A	76	80	anti-parallel
Strand 3	A	154	158	anti-parallel
Strand 4	A	272	280	anti-parallel
Strand 5	A	247	254	anti-parallel
Strand 6	A	210	213	anti-parallel

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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	96	103	first strand
Strand 2	A	106	112	anti-parallel
Strand 3	A	126	133	anti-parallel
Strand 4	A	139	148	anti-parallel
Strand 5	A	288	296	anti-parallel
Strand 6	A	234	240	anti-parallel
Strand 7	A	226	230	anti-parallel
Strand 8	A	174	177	anti-parallel
Strand 9	A	183	186	anti-parallel
Strand 10	A	546	547	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	418	421	first strand
Strand 2	A	377	382	parallel
Strand 3	A	337	342	parallel
Strand 4	A	593	596	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	482	485	first strand
Strand 2	A	513	517	parallel
Strand 3	A	529	531	parallel
Strand 4	A	560	562	parallel

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There are 10 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	627	632	first strand
Strand 2	A	639	644	anti-parallel
Strand 3	A	648	653	anti-parallel
Strand 4	A	671	675	anti-parallel
Strand 5	A	681	692	anti-parallel
Strand 6	B	681	692	anti-parallel
Strand 7	B	671	675	anti-parallel
Strand 8	B	649	653	anti-parallel
Strand 9	B	639	644	anti-parallel
Strand 10	B	627	632	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	659	660	first strand
Strand 2	A	666	667	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	36	39	first strand
Strand 2	B	43	47	anti-parallel
Strand 3	B	54	58	anti-parallel
Strand 4	B	64	65	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	86	90	first strand
Strand 2	B	76	80	anti-parallel
Strand 3	B	154	158	anti-parallel
Strand 4	B	272	280	anti-parallel
Strand 5	B	166	167	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	86	90	first strand
Strand 2	B	76	80	anti-parallel
Strand 3	B	154	158	anti-parallel
Strand 4	B	272	280	anti-parallel
Strand 5	B	247	254	anti-parallel
Strand 6	B	210	213	anti-parallel

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There are 10 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	96	101	first strand
Strand 2	B	106	112	anti-parallel
Strand 3	B	126	133	anti-parallel
Strand 4	B	139	148	anti-parallel
Strand 5	B	288	296	anti-parallel
Strand 6	B	234	240	anti-parallel
Strand 7	B	226	230	anti-parallel
Strand 8	B	174	177	anti-parallel
Strand 9	B	183	186	anti-parallel
Strand 10	B	546	547	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	418	421	first strand
Strand 2	B	377	382	parallel
Strand 3	B	337	342	parallel
Strand 4	B	593	596	parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	482	485	first strand
Strand 2	B	513	517	parallel
Strand 3	B	529	531	parallel
Strand 4	B	560	562	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	659	660	first strand
Strand 2	B	666	667	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	36	39	first strand
Strand 2	C	43	47	anti-parallel
Strand 3	C	54	58	anti-parallel
Strand 4	C	63	65	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	86	90	first strand
Strand 2	C	76	80	anti-parallel
Strand 3	C	154	158	anti-parallel
Strand 4	C	272	280	anti-parallel
Strand 5	C	166	167	anti-parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	86	90	first strand
Strand 2	C	76	80	anti-parallel
Strand 3	C	154	158	anti-parallel
Strand 4	C	272	280	anti-parallel
Strand 5	C	247	254	anti-parallel
Strand 6	C	210	213	anti-parallel

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There are 10 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	96	103	first strand
Strand 2	C	106	112	anti-parallel
Strand 3	C	126	133	anti-parallel
Strand 4	C	139	148	anti-parallel
Strand 5	C	288	296	anti-parallel
Strand 6	C	234	240	anti-parallel
Strand 7	C	226	230	anti-parallel
Strand 8	C	174	177	anti-parallel
Strand 9	C	183	186	anti-parallel
Strand 10	C	546	547	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	418	421	first strand
Strand 2	C	377	382	parallel
Strand 3	C	337	342	parallel
Strand 4	C	593	596	parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	423	424	first strand
Strand 2	C	482	486	parallel
Strand 3	C	513	517	parallel
Strand 4	C	529	531	parallel
Strand 5	C	560	562	parallel

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There are 10 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	627	632	first strand
Strand 2	C	639	644	anti-parallel
Strand 3	C	648	653	anti-parallel
Strand 4	C	671	675	anti-parallel
Strand 5	C	681	692	anti-parallel
Strand 6	D	681	692	anti-parallel
Strand 7	D	671	675	anti-parallel
Strand 8	D	648	653	anti-parallel
Strand 9	D	639	644	anti-parallel
Strand 10	D	627	632	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	659	661	first strand
Strand 2	C	665	667	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	36	39	first strand
Strand 2	D	43	47	anti-parallel
Strand 3	D	54	58	anti-parallel
Strand 4	D	63	65	anti-parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	86	90	first strand
Strand 2	D	76	80	anti-parallel
Strand 3	D	154	158	anti-parallel
Strand 4	D	272	280	anti-parallel
Strand 5	D	166	167	anti-parallel

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There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	86	90	first strand
Strand 2	D	76	80	anti-parallel
Strand 3	D	154	158	anti-parallel
Strand 4	D	272	280	anti-parallel
Strand 5	D	247	254	anti-parallel
Strand 6	D	210	213	anti-parallel

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There are 10 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	96	103	first strand
Strand 2	D	106	112	anti-parallel
Strand 3	D	126	133	anti-parallel
Strand 4	D	139	148	anti-parallel
Strand 5	D	288	296	anti-parallel
Strand 6	D	234	240	anti-parallel
Strand 7	D	226	230	anti-parallel
Strand 8	D	174	177	anti-parallel
Strand 9	D	183	186	anti-parallel
Strand 10	D	546	547	anti-parallel

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There are 8 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	560	562	first strand
Strand 2	D	529	531	parallel
Strand 3	D	513	517	parallel
Strand 4	D	482	485	parallel
Strand 5	D	418	423	parallel
Strand 6	D	377	382	parallel
Strand 7	D	337	342	parallel
Strand 8	D	593	596	parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	659	660	first strand
Strand 2	D	666	667	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8RZK

Analysis of interatomic Contacts of Structural Units in PDB entry:
8RZK