Analysis of interatomic Contacts of Structural Units in PDB entry:
8RZZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8RZZ entry

There are 18 chains in PDB entry 8RZZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 3	PHE 65
A	ASN 67	PRO 231
B	ASP 2	PHE 65
B	ASN 67	PRO 231
C	THR 2	LYS 308
D	THR 2	GLN 321
E	MET 1	PHE 65
E	ASN 67	PRO 231
F	ASP 2	PHE 65
F	ASN 67	PRO 231
G	THR 2	LYS 308
H	THR 2	ASN 309
I	LEU 3	PHE 65
I	ASN 67	PRO 231
J	MET 1	PHE 65
J	ASN 67	PRO 231
K	THR 2	LYS 308
L	MET 1	GLN 321

There are122 helices in PDB entry 8RZZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	3	7	Right-handed 310
Helix 2	AA2	A	57	62	Right-handed 310
Helix 3	AA3	A	79	84	Right-handed alpha
Helix 4	AA4	B	57	62	Right-handed 310
Helix 5	AA5	B	79	84	Right-handed alpha
Helix 6	AA6	C	10	14	Right-handed 310
Helix 7	AA7	C	16	22	Right-handed alpha
Helix 8	AA8	C	56	61	Right-handed 310
Helix 9	AA9	C	63	67	Right-handed 310
Helix 10	AB1	C	93	107	Right-handed alpha
Helix 11	AB2	C	120	133	Right-handed alpha
Helix 12	AB3	C	161	168	Right-handed alpha
Helix 13	AB4	C	169	176	Right-handed alpha
Helix 14	AB5	C	179	184	Right-handed alpha
Helix 15	AB6	C	184	189	Right-handed alpha
Helix 16	AB7	C	195	204	Right-handed alpha
Helix 17	AB8	C	205	207	Right-handed 310
Helix 18	AB9	C	210	212	Right-handed 310
Helix 19	AC1	C	213	219	Right-handed alpha
Helix 20	AC2	C	220	223	Right-handed 310
Helix 21	AC3	C	230	245	Right-handed alpha
Helix 22	AC4	C	262	271	Right-handed alpha
Helix 23	AC5	C	291	308	Right-handed alpha
Helix 24	AC6	D	10	14	Right-handed 310
Helix 25	AC7	D	16	22	Right-handed alpha
Helix 26	AC8	D	56	61	Right-handed 310
Helix 27	AC9	D	63	67	Right-handed 310
Helix 28	AD1	D	93	106	Right-handed alpha
Helix 29	AD2	D	120	133	Right-handed alpha
Helix 30	AD3	D	161	168	Right-handed alpha
Helix 31	AD4	D	169	176	Right-handed alpha
Helix 32	AD5	D	179	184	Right-handed alpha
Helix 33	AD6	D	184	189	Right-handed alpha
Helix 34	AD7	D	195	204	Right-handed alpha
Helix 35	AD8	D	205	207	Right-handed 310
Helix 36	AD9	D	210	212	Right-handed 310
Helix 37	AE1	D	213	222	Right-handed alpha
Helix 38	AE2	D	230	246	Right-handed alpha
Helix 39	AE3	D	262	272	Right-handed alpha
Helix 40	AE4	D	286	290	Right-handed 310
Helix 41	AE5	D	291	308	Right-handed alpha
Helix 42	AE6	E	57	62	Right-handed 310
Helix 43	AE7	E	79	84	Right-handed alpha
Helix 44	AE8	E	131	136	Right-handed alpha
Helix 45	AE9	F	2	7	Right-handed 310
Helix 46	AF1	F	57	62	Right-handed 310
Helix 47	AF2	F	81	85	Right-handed 310
Helix 48	AF3	G	10	14	Right-handed 310
Helix 49	AF4	G	16	22	Right-handed alpha
Helix 50	AF5	G	56	61	Right-handed 310
Helix 51	AF6	G	63	67	Right-handed 310
Helix 52	AF7	G	93	106	Right-handed alpha
Helix 53	AF8	G	120	133	Right-handed alpha
Helix 54	AF9	G	159	167	Right-handed alpha
Helix 55	AG1	G	169	175	Right-handed alpha
Helix 56	AG2	G	179	184	Right-handed alpha
Helix 57	AG3	G	184	189	Right-handed alpha
Helix 58	AG4	G	195	204	Right-handed alpha
Helix 59	AG5	G	205	207	Right-handed 310
Helix 60	AG6	G	210	212	Right-handed 310
Helix 61	AG7	G	213	219	Right-handed alpha
Helix 62	AG8	G	220	223	Right-handed 310
Helix 63	AG9	G	230	246	Right-handed alpha
Helix 64	AH1	G	262	271	Right-handed alpha
Helix 65	AH2	G	286	290	Right-handed 310
Helix 66	AH3	G	291	307	Right-handed alpha
Helix 67	AH4	H	10	14	Right-handed 310
Helix 68	AH5	H	16	22	Right-handed alpha
Helix 69	AH6	H	56	61	Right-handed 310
Helix 70	AH7	H	63	67	Right-handed 310
Helix 71	AH8	H	93	108	Right-handed alpha
Helix 72	AH9	H	120	133	Right-handed alpha
Helix 73	AI1	H	161	167	Right-handed alpha
Helix 74	AI2	H	169	176	Right-handed alpha
Helix 75	AI3	H	179	184	Right-handed alpha
Helix 76	AI4	H	184	189	Right-handed alpha
Helix 77	AI5	H	195	204	Right-handed alpha
Helix 78	AI6	H	205	207	Right-handed 310
Helix 79	AI7	H	210	212	Right-handed 310
Helix 80	AI8	H	213	222	Right-handed alpha
Helix 81	AI9	H	230	246	Right-handed alpha
Helix 82	AJ1	H	262	271	Right-handed alpha
Helix 83	AJ2	H	286	290	Right-handed 310
Helix 84	AJ3	H	291	307	Right-handed alpha
Helix 85	AJ4	I	57	62	Right-handed 310
Helix 86	AJ5	J	57	62	Right-handed 310
Helix 87	AJ6	K	16	22	Right-handed alpha
Helix 88	AJ7	K	56	61	Right-handed 310
Helix 89	AJ8	K	63	67	Right-handed 310
Helix 90	AJ9	K	93	106	Right-handed alpha
Helix 91	AK1	K	120	133	Right-handed alpha
Helix 92	AK2	K	161	167	Right-handed alpha
Helix 93	AK3	K	169	176	Right-handed alpha
Helix 94	AK4	K	179	184	Right-handed alpha
Helix 95	AK5	K	184	189	Right-handed alpha
Helix 96	AK6	K	195	204	Right-handed alpha
Helix 97	AK7	K	205	207	Right-handed 310
Helix 98	AK8	K	210	212	Right-handed 310
Helix 99	AK9	K	213	219	Right-handed alpha
Helix 100	AL1	K	220	223	Right-handed 310
Helix 101	AL2	K	230	246	Right-handed alpha
Helix 102	AL3	K	262	272	Right-handed alpha
Helix 103	AL4	K	286	290	Right-handed 310
Helix 104	AL5	K	291	307	Right-handed alpha
Helix 105	AL6	L	10	14	Right-handed 310
Helix 106	AL7	L	16	22	Right-handed alpha
Helix 107	AL8	L	56	61	Right-handed 310
Helix 108	AL9	L	63	67	Right-handed 310
Helix 109	AM1	L	93	106	Right-handed alpha
Helix 110	AM2	L	120	133	Right-handed alpha
Helix 111	AM3	L	161	167	Right-handed alpha
Helix 112	AM4	L	169	175	Right-handed alpha
Helix 113	AM5	L	179	184	Right-handed alpha
Helix 114	AM6	L	184	189	Right-handed alpha
Helix 115	AM7	L	195	204	Right-handed alpha
Helix 116	AM8	L	205	207	Right-handed 310
Helix 117	AM9	L	210	212	Right-handed 310
Helix 118	AN1	L	213	219	Right-handed alpha
Helix 119	AN2	L	220	223	Right-handed 310
Helix 120	AN3	L	230	246	Right-handed alpha
Helix 121	AN4	L	262	271	Right-handed alpha
Helix 122	AN5	L	291	320	Right-handed alpha

There are 14 sheets in PDB entry 8RZZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 13 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	138	141	first strand
Strand 2	A	154	165	anti-parallel
Strand 3	A	170	181	anti-parallel
Strand 4	A	89	97	anti-parallel
Strand 5	A	102	111	anti-parallel
Strand 6	A	116	125	anti-parallel
Strand 7	A	11	22	parallel
Strand 8	A	25	36	anti-parallel
Strand 9	A	41	50	anti-parallel
Strand 10	A	210	219	anti-parallel
Strand 11	A	191	201	anti-parallel
Strand 12	A	144	151	anti-parallel
Strand 13	A	154	165	anti-parallel

Back to list of sheets
Back to top of page

There are 13 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	138	141	first strand
Strand 2	B	154	165	anti-parallel
Strand 3	B	170	181	anti-parallel
Strand 4	B	89	97	anti-parallel
Strand 5	B	102	112	anti-parallel
Strand 6	B	115	125	anti-parallel
Strand 7	B	11	22	parallel
Strand 8	B	25	36	anti-parallel
Strand 9	B	41	50	anti-parallel
Strand 10	B	210	219	anti-parallel
Strand 11	B	192	200	anti-parallel
Strand 12	B	144	151	anti-parallel
Strand 13	B	154	165	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	25	29	first strand
Strand 2	C	32	38	anti-parallel
Strand 3	C	72	76	anti-parallel
Strand 4	C	46	50	parallel
Strand 5	C	114	119	parallel
Strand 6	C	137	143	parallel
Strand 7	C	252	259	parallel
Strand 8	C	276	283	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	28	29	first strand
Strand 2	D	32	33	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	36	38	first strand
Strand 2	D	72	76	anti-parallel
Strand 3	D	46	50	parallel
Strand 4	D	114	119	parallel
Strand 5	D	137	143	parallel
Strand 6	D	252	259	parallel
Strand 7	D	276	283	parallel

Back to list of sheets
Back to top of page

There are 13 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	138	141	first strand
Strand 2	E	154	165	anti-parallel
Strand 3	E	170	181	anti-parallel
Strand 4	E	89	97	anti-parallel
Strand 5	E	102	111	anti-parallel
Strand 6	E	116	125	anti-parallel
Strand 7	E	11	22	parallel
Strand 8	E	25	36	anti-parallel
Strand 9	E	41	50	anti-parallel
Strand 10	E	210	219	anti-parallel
Strand 11	E	192	200	anti-parallel
Strand 12	E	144	151	anti-parallel
Strand 13	E	154	165	anti-parallel

Back to list of sheets
Back to top of page

There are 13 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	138	141	first strand
Strand 2	F	154	165	anti-parallel
Strand 3	F	170	181	anti-parallel
Strand 4	F	88	97	anti-parallel
Strand 5	F	102	112	anti-parallel
Strand 6	F	115	125	anti-parallel
Strand 7	F	11	22	parallel
Strand 8	F	25	36	anti-parallel
Strand 9	F	41	50	anti-parallel
Strand 10	F	210	219	anti-parallel
Strand 11	F	192	200	anti-parallel
Strand 12	F	144	151	anti-parallel
Strand 13	F	154	165	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	25	29	first strand
Strand 2	G	32	38	anti-parallel
Strand 3	G	72	76	anti-parallel
Strand 4	G	46	50	parallel
Strand 5	G	114	119	parallel
Strand 6	G	137	143	parallel
Strand 7	G	252	259	parallel
Strand 8	G	276	283	parallel

Back to list of sheets
Back to top of page

There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	25	29	first strand
Strand 2	H	32	38	anti-parallel
Strand 3	H	72	76	anti-parallel
Strand 4	H	46	50	parallel
Strand 5	H	114	119	parallel
Strand 6	H	137	143	parallel
Strand 7	H	252	259	parallel
Strand 8	H	276	283	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	138	141	first strand
Strand 2	I	154	165	anti-parallel
Strand 3	I	144	151	anti-parallel
Strand 4	I	191	201	anti-parallel
Strand 5	J	229	230	anti-parallel

Back to list of sheets
Back to top of page

There are 12 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	138	141	first strand
Strand 2	I	154	165	anti-parallel
Strand 3	I	170	181	anti-parallel
Strand 4	I	89	97	anti-parallel
Strand 5	I	102	111	anti-parallel
Strand 6	I	116	125	anti-parallel
Strand 7	I	11	22	parallel
Strand 8	I	25	36	anti-parallel
Strand 9	I	41	50	anti-parallel
Strand 10	I	209	219	anti-parallel
Strand 11	I	191	201	anti-parallel
Strand 12	J	229	230	anti-parallel

Back to list of sheets
Back to top of page

There are 13 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	138	141	first strand
Strand 2	J	154	165	anti-parallel
Strand 3	J	170	181	anti-parallel
Strand 4	J	89	97	anti-parallel
Strand 5	J	102	109	anti-parallel
Strand 6	J	116	125	anti-parallel
Strand 7	J	11	22	parallel
Strand 8	J	25	36	anti-parallel
Strand 9	J	41	50	anti-parallel
Strand 10	J	210	219	anti-parallel
Strand 11	J	192	200	anti-parallel
Strand 12	J	144	151	anti-parallel
Strand 13	J	154	165	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	25	29	first strand
Strand 2	K	32	38	anti-parallel
Strand 3	K	72	76	anti-parallel
Strand 4	K	46	50	parallel
Strand 5	K	114	119	parallel
Strand 6	K	137	143	parallel
Strand 7	K	252	259	parallel
Strand 8	K	276	283	parallel

Back to list of sheets
Back to top of page

There are 8 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	25	29	first strand
Strand 2	L	32	38	anti-parallel
Strand 3	L	72	76	anti-parallel
Strand 4	L	46	50	parallel
Strand 5	L	114	119	parallel
Strand 6	L	137	143	parallel
Strand 7	L	252	259	parallel
Strand 8	L	276	283	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8RZZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
8RZZ