Analysis of interatomic Contacts of Structural Units in PDB entry:
8S0C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8S0C entry

There are 7 chains in PDB entry 8S0C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 748ASP 860
X
 T 1 A 26
Y
 T 33 A 58
B
 GLN 270TYR 460
C
 THR 3TRP 709
D
 LEU 17SER 431
E
 VAL 7ASP 433
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 82 helices in PDB entry 8S0C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
748 759Right-handed alpha
Helix 2
AA2
A
762 769Right-handed alpha
Helix 3
AA3
A
771 789Right-handed alpha
Helix 4
AA4
A
794 810Right-handed alpha
Helix 5
AA5
A
815 829Right-handed alpha
Helix 6
AA6
A
850 860Right-handed alpha
Helix 7
AA7
B
271 276Right-handed alpha
Helix 8
AA8
B
283 296Right-handed alpha
Helix 9
AA9
B
297 307Right-handed alpha
Helix 10
AB1
B
319 330Right-handed alpha
Helix 11
AB2
B
347 358Right-handed alpha
Helix 12
AB3
B
370 383Right-handed alpha
Helix 13
AB4
B
397 401Right-handed 310
Helix 14
AB5
B
402 414Right-handed alpha
Helix 15
AB6
B
428 433Right-handed 310
Helix 16
AB7
B
434 441Right-handed alpha
Helix 17
AB8
C
26 31Right-handed alpha
Helix 18
AB9
C
36 85Right-handed alpha
Helix 19
AC1
C
113 127Right-handed alpha
Helix 20
AC2
C
137 141Right-handed 310
Helix 21
AC3
C
143 159Right-handed alpha
Helix 22
AC4
C
180 193Right-handed alpha
Helix 23
AC5
C
221 225Right-handed 310
Helix 24
AC6
C
226 239Right-handed alpha
Helix 25
AC7
C
257 263Right-handed alpha
Helix 26
AC8
C
264 269Right-handed alpha
Helix 27
AC9
C
282 291Right-handed alpha
Helix 28
AD1
C
303 318Right-handed alpha
Helix 29
AD2
C
321 339Right-handed alpha
Helix 30
AD3
C
340 344Right-handed 310
Helix 31
AD4
C
347 357Right-handed alpha
Helix 32
AD5
C
359 368Right-handed alpha
Helix 33
AD6
C
369 375Right-handed alpha
Helix 34
AD7
C
403 426Right-handed alpha
Helix 35
AD8
C
434 445Right-handed alpha
Helix 36
AD9
C
453 461Right-handed alpha
Helix 37
AE1
C
464 482Right-handed alpha
Helix 38
AE2
C
487 500Right-handed alpha
Helix 39
AE3
C
550 567Right-handed alpha
Helix 40
AE4
C
570 574Right-handed 310
Helix 41
AE5
C
584 593Right-handed alpha
Helix 42
AE6
C
595 606Right-handed alpha
Helix 43
AE7
C
607 610Right-handed 310
Helix 44
AE8
C
628 638Right-handed alpha
Helix 45
AE9
C
645 660Right-handed alpha
Helix 46
AF1
C
675 691Right-handed alpha
Helix 47
AF2
D
18 29Right-handed alpha
Helix 48
AF3
D
40 57Right-handed alpha
Helix 49
AF4
D
72 84Right-handed alpha
Helix 50
AF5
D
106 118Right-handed alpha
Helix 51
AF6
D
161 167Right-handed 310
Helix 52
AF7
D
170 182Right-handed alpha
Helix 53
AF8
D
203 210Right-handed alpha
Helix 54
AF9
D
222 234Right-handed alpha
Helix 55
AG1
D
242 258Right-handed alpha
Helix 56
AG2
D
259 273Right-handed alpha
Helix 57
AG3
D
275 288Right-handed alpha
Helix 58
AG4
D
298 310Right-handed alpha
Helix 59
AG5
D
312 320Right-handed alpha
Helix 60
AG6
D
322 339Right-handed alpha
Helix 61
AG7
D
345 360Right-handed alpha
Helix 62
AG8
D
368 382Right-handed alpha
Helix 63
AG9
D
407 417Right-handed alpha
Helix 64
AH1
D
422 431Right-handed alpha
Helix 65
AH2
E
12 23Right-handed alpha
Helix 66
AH3
E
44 55Right-handed alpha
Helix 67
AH4
E
68 85Right-handed alpha
Helix 68
AH5
E
98 110Right-handed alpha
Helix 69
AH6
E
126 133Right-handed 310
Helix 70
AH7
E
136 143Right-handed alpha
Helix 71
AH8
E
143 149Right-handed alpha
Helix 72
AH9
E
161 165Right-handed 310
Helix 73
AI1
E
183 192Right-handed alpha
Helix 74
AI2
E
200 216Right-handed alpha
Helix 75
AI3
E
221 243Right-handed alpha
Helix 76
AI4
E
249 268Right-handed alpha
Helix 77
AI5
E
274 284Right-handed alpha
Helix 78
AI6
E
305 318Right-handed alpha
Helix 79
AI7
E
358 370Right-handed alpha
Helix 80
AI8
E
377 389Right-handed alpha
Helix 81
AI9
E
412 423Right-handed alpha
Helix 82
AJ1
E
427 431Right-handed 310
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There are 6 sheets in PDB entry 8S0C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
832 833first strand
Strand 2
A
846 847anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
336 339first strand
Strand 2
B
388 392parallel
Strand 3
B
418 424parallel
Strand 4
B
310 314parallel
Strand 5
B
443 447parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
133 136first strand
Strand 2
C
216 219parallel
Strand 3
C
247 251parallel
Strand 4
C
100 105parallel
Strand 5
C
271 275parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
95 100first strand
Strand 2
D
154 159parallel
Strand 3
D
187 193parallel
Strand 4
D
61 66parallel
Strand 5
D
214 216parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
58 62first strand
Strand 2
E
120 125parallel
Strand 3
E
152 156parallel
Strand 4
E
32 36parallel
Strand 5
E
175 178parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
393 395first strand
Strand 2
E
407 409anti-parallel
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