Analysis of interatomic Contacts of Structural Units in PDB entry:
8S0U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8S0U entry

There are 2 chains in PDB entry 8S0U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 273THR 529
B
 ALA 1THR 257
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 8S0U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
284 303Right-handed alpha
Helix 2
AA2
A
312 325Right-handed alpha
Helix 3
AA3
A
339 353Right-handed alpha
Helix 4
AA4
A
362 369Right-handed alpha
Helix 5
AA5
A
377 392Right-handed alpha
Helix 6
AA6
A
515 520Right-handed 310
Helix 7
AA7
B
12 31Right-handed alpha
Helix 8
AA8
B
40 53Right-handed alpha
Helix 9
AA9
B
67 81Right-handed alpha
Helix 10
AB1
B
90 95Right-handed alpha
Helix 11
AB2
B
105 120Right-handed alpha
Helix 12
AB3
B
243 248Right-handed 310
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There are 8 sheets in PDB entry 8S0U. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
482 483first strand
Strand 2
A
446 453anti-parallel
Strand 3
A
456 461anti-parallel
Strand 4
A
465 470anti-parallel
Strand 5
A
496 505anti-parallel
Strand 6
A
510 514anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
482 483first strand
Strand 2
A
446 453anti-parallel
Strand 3
A
456 461anti-parallel
Strand 4
A
465 470anti-parallel
Strand 5
A
496 505anti-parallel
Strand 6
A
430 433anti-parallel
Strand 7
A
409 413anti-parallel
Strand 8
A
523 525parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
416 420first strand
Strand 2
A
423 427anti-parallel
Strand 3
B
4 5anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
439 441first strand
Strand 2
A
488 491anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
210 211first strand
Strand 2
B
174 178anti-parallel
Strand 3
B
184 189anti-parallel
Strand 4
B
193 198anti-parallel
Strand 5
B
224 233anti-parallel
Strand 6
B
238 242anti-parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
210 211first strand
Strand 2
B
174 178anti-parallel
Strand 3
B
184 189anti-parallel
Strand 4
B
193 198anti-parallel
Strand 5
B
224 233anti-parallel
Strand 6
B
158 161anti-parallel
Strand 7
B
137 141anti-parallel
Strand 8
B
251 253parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
144 147first strand
Strand 2
B
152 155anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
167 169first strand
Strand 2
B
216 219anti-parallel
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