Analysis of interatomic Contacts of Structural Units in PDB entry:
8S1V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8S1V entry

There are 2 chains in PDB entry 8S1V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
E
 ASP 2PHE 65
E
 ASN 68PRO 232
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 8S1V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
E
57 62Right-handed 310
Helix 2
AA2
E
80 85Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8S1V.

There are 13 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
139 142first strand
Strand 2
E
155 166anti-parallel
Strand 3
E
171 182anti-parallel
Strand 4
E
90 98anti-parallel
Strand 5
E
103 113anti-parallel
Strand 6
E
116 126anti-parallel
Strand 7
E
11 22parallel
Strand 8
E
25 36anti-parallel
Strand 9
E
41 50anti-parallel
Strand 10
E
210 220anti-parallel
Strand 11
E
193 205anti-parallel
Strand 12
E
145 152anti-parallel
Strand 13
E
155 166anti-parallel
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