Analysis of interatomic Contacts of Structural Units in PDB entry:
8S24

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8S24 entry

There is 1 chain in PDB entry 8S24 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 378	GLU 5205

There are224 helices in PDB entry 8S24. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	523	539	Right-handed alpha
Helix 2	AA2	A	545	565	Right-handed alpha
Helix 3	AA3	A	584	599	Right-handed alpha
Helix 4	AA4	A	619	633	Right-handed alpha
Helix 5	AA5	A	640	648	Right-handed alpha
Helix 6	AA6	A	654	667	Right-handed alpha
Helix 7	AA7	A	671	682	Right-handed alpha
Helix 8	AA8	A	689	693	Right-handed 310
Helix 9	AA9	A	694	703	Right-handed alpha
Helix 10	AB1	A	710	714	Right-handed 310
Helix 11	AB2	A	715	720	Right-handed alpha
Helix 12	AB3	A	727	734	Right-handed alpha
Helix 13	AB4	A	737	747	Right-handed alpha
Helix 14	AB5	A	749	754	Right-handed alpha
Helix 15	AB6	A	755	765	Right-handed alpha
Helix 16	AB7	A	766	769	Right-handed 310
Helix 17	AB8	A	770	777	Right-handed alpha
Helix 18	AB9	A	777	784	Right-handed alpha
Helix 19	AC1	A	785	797	Right-handed alpha
Helix 20	AC2	A	798	807	Right-handed alpha
Helix 21	AC3	A	810	831	Right-handed alpha
Helix 22	AC4	A	842	859	Right-handed alpha
Helix 23	AC5	A	865	881	Right-handed alpha
Helix 24	AC6	A	899	918	Right-handed alpha
Helix 25	AC7	A	934	944	Right-handed alpha
Helix 26	AC8	A	952	967	Right-handed alpha
Helix 27	AC9	A	969	980	Right-handed alpha
Helix 28	AD1	A	989	1009	Right-handed alpha
Helix 29	AD2	A	1021	1037	Right-handed alpha
Helix 30	AD3	A	1043	1054	Right-handed alpha
Helix 31	AD4	A	1055	1067	Right-handed alpha
Helix 32	AD5	A	1068	1073	Right-handed alpha
Helix 33	AD6	A	1075	1099	Right-handed alpha
Helix 34	AD7	A	1102	1112	Right-handed alpha
Helix 35	AD8	A	1112	1125	Right-handed alpha
Helix 36	AD9	A	1136	1165	Right-handed alpha
Helix 37	AE1	A	1178	1184	Right-handed alpha
Helix 38	AE2	A	1185	1189	Right-handed 310
Helix 39	AE3	A	1190	1195	Right-handed alpha
Helix 40	AE4	A	1214	1227	Right-handed alpha
Helix 41	AE5	A	1230	1237	Right-handed alpha
Helix 42	AE6	A	1273	1278	Right-handed alpha
Helix 43	AE7	A	1278	1296	Right-handed alpha
Helix 44	AE8	A	1299	1308	Right-handed alpha
Helix 45	AE9	A	1309	1311	Right-handed 310
Helix 46	AF1	A	1313	1323	Right-handed alpha
Helix 47	AF2	A	1324	1327	Right-handed 310
Helix 48	AF3	A	1340	1366	Right-handed alpha
Helix 49	AF4	A	1372	1374	Right-handed 310
Helix 50	AF5	A	1375	1380	Right-handed alpha
Helix 51	AF6	A	1384	1390	Right-handed alpha
Helix 52	AF7	A	1398	1407	Right-handed alpha
Helix 53	AF8	A	1411	1424	Right-handed alpha
Helix 54	AF9	A	1425	1435	Right-handed alpha
Helix 55	AG1	A	1438	1451	Right-handed alpha
Helix 56	AG2	A	1455	1472	Right-handed alpha
Helix 57	AG3	A	1472	1477	Right-handed alpha
Helix 58	AG4	A	1484	1502	Right-handed alpha
Helix 59	AG5	A	1504	1515	Right-handed alpha
Helix 60	AG6	A	1515	1525	Right-handed alpha
Helix 61	AG7	A	1532	1544	Right-handed alpha
Helix 62	AG8	A	1558	1562	Right-handed alpha
Helix 63	AG9	A	1581	1595	Right-handed alpha
Helix 64	AH1	A	1603	1629	Right-handed alpha
Helix 65	AH2	A	1632	1637	Right-handed 310
Helix 66	AH3	A	1668	1698	Right-handed alpha
Helix 67	AH4	A	1699	1704	Right-handed 310
Helix 68	AH5	A	1705	1717	Right-handed alpha
Helix 69	AH6	A	1722	1731	Right-handed alpha
Helix 70	AH7	A	1737	1746	Right-handed alpha
Helix 71	AH8	A	1750	1770	Right-handed alpha
Helix 72	AH9	A	1773	1788	Right-handed alpha
Helix 73	AI1	A	1788	1793	Right-handed alpha
Helix 74	AI2	A	1798	1813	Right-handed alpha
Helix 75	AI3	A	1836	1850	Right-handed alpha
Helix 76	AI4	A	1870	1883	Right-handed alpha
Helix 77	AI5	A	1896	1900	Right-handed 310
Helix 78	AI6	A	1901	1918	Right-handed alpha
Helix 79	AI7	A	1933	1935	Right-handed 310
Helix 80	AI8	A	1937	1943	Right-handed alpha
Helix 81	AI9	A	1955	1968	Right-handed alpha
Helix 82	AJ1	A	1975	1980	Right-handed 310
Helix 83	AJ2	A	1997	2013	Right-handed alpha
Helix 84	AJ3	A	2031	2040	Right-handed alpha
Helix 85	AJ4	A	2041	2044	Right-handed 310
Helix 86	AJ5	A	2065	2075	Right-handed alpha
Helix 87	AJ6	A	2122	2127	Right-handed 310
Helix 88	AJ7	A	2134	2142	Right-handed alpha
Helix 89	AJ8	A	2155	2160	Right-handed alpha
Helix 90	AJ9	A	2161	2176	Right-handed alpha
Helix 91	AK1	A	2193	2205	Right-handed alpha
Helix 92	AK2	A	2211	2231	Right-handed alpha
Helix 93	AK3	A	2246	2264	Right-handed alpha
Helix 94	AK4	A	2348	2357	Right-handed alpha
Helix 95	AK5	A	2364	2368	Right-handed 310
Helix 96	AK6	A	2369	2381	Right-handed alpha
Helix 97	AK7	A	2396	2413	Right-handed alpha
Helix 98	AK8	A	2425	2439	Right-handed alpha
Helix 99	AK9	A	2456	2478	Right-handed alpha
Helix 100	AL1	A	2488	2493	Right-handed 310
Helix 101	AL2	A	2494	2503	Right-handed alpha
Helix 102	AL3	A	2531	2540	Right-handed alpha
Helix 103	AL4	A	2562	2564	Right-handed 310
Helix 104	AL5	A	2586	2606	Right-handed alpha
Helix 105	AL6	A	2608	2629	Right-handed alpha
Helix 106	AL7	A	2637	2654	Right-handed alpha
Helix 107	AL8	A	2654	2669	Right-handed alpha
Helix 108	AL9	A	2679	2693	Right-handed alpha
Helix 109	AM1	A	2699	2709	Right-handed alpha
Helix 110	AM2	A	2717	2734	Right-handed alpha
Helix 111	AM3	A	2745	2761	Right-handed alpha
Helix 112	AM4	A	2775	2786	Right-handed alpha
Helix 113	AM5	A	2787	2791	Right-handed 310
Helix 114	AM6	A	2795	2799	Right-handed 310
Helix 115	AM7	A	2814	2830	Right-handed alpha
Helix 116	AM8	A	2846	2850	Right-handed 310
Helix 117	AM9	A	2856	2858	Right-handed 310
Helix 118	AN1	A	2859	2867	Right-handed alpha
Helix 119	AN2	A	2874	2878	Right-handed 310
Helix 120	AN3	A	2890	2894	Right-handed 310
Helix 121	AN4	A	2906	2918	Right-handed alpha
Helix 122	AN5	A	2921	2929	Right-handed alpha
Helix 123	AN6	A	2931	2946	Right-handed alpha
Helix 124	AN7	A	2952	2971	Right-handed alpha
Helix 125	AN8	A	2975	2987	Right-handed alpha
Helix 126	AN9	A	2996	3001	Right-handed alpha
Helix 127	AO1	A	3013	3023	Right-handed alpha
Helix 128	AO2	A	3049	3059	Right-handed alpha
Helix 129	AO3	A	3079	3097	Right-handed alpha
Helix 130	AO4	A	3112	3117	Right-handed alpha
Helix 131	AO5	A	3154	3161	Right-handed alpha
Helix 132	AO6	A	3162	3168	Right-handed alpha
Helix 133	AO7	A	3175	3179	Right-handed 310
Helix 134	AO8	A	3181	3200	Right-handed alpha
Helix 135	AO9	A	3213	3218	Right-handed alpha
Helix 136	AP1	A	3224	3238	Right-handed alpha
Helix 137	AP2	A	3243	3260	Right-handed alpha
Helix 138	AP3	A	3263	3274	Right-handed alpha
Helix 139	AP4	A	3277	3289	Right-handed alpha
Helix 140	AP5	A	3295	3306	Right-handed alpha
Helix 141	AP6	A	3326	3337	Right-handed alpha
Helix 142	AP7	A	3350	3352	Right-handed 310
Helix 143	AP8	A	3354	3367	Right-handed alpha
Helix 144	AP9	A	3387	3405	Right-handed alpha
Helix 145	AQ1	A	3457	3461	Right-handed 310
Helix 146	AQ2	A	3531	3545	Right-handed alpha
Helix 147	AQ3	A	3555	3568	Right-handed alpha
Helix 148	AQ4	A	3572	3596	Right-handed alpha
Helix 149	AQ5	A	3599	3601	Right-handed 310
Helix 150	AQ6	A	3602	3609	Right-handed alpha
Helix 151	AQ7	A	3610	3618	Right-handed alpha
Helix 152	AQ8	A	3619	3644	Right-handed alpha
Helix 153	AQ9	A	3647	3654	Right-handed alpha
Helix 154	AR1	A	3658	3671	Right-handed alpha
Helix 155	AR2	A	3711	3730	Right-handed alpha
Helix 156	AR3	A	3734	3746	Right-handed alpha
Helix 157	AR4	A	3746	3753	Right-handed alpha
Helix 158	AR5	A	3757	3776	Right-handed alpha
Helix 159	AR6	A	3780	3801	Right-handed alpha
Helix 160	AR7	A	3810	3821	Right-handed alpha
Helix 161	AR8	A	3821	3835	Right-handed alpha
Helix 162	AR9	A	3836	3842	Right-handed 310
Helix 163	AS1	A	3857	3873	Right-handed alpha
Helix 164	AS2	A	3878	3889	Right-handed alpha
Helix 165	AS3	A	3889	3897	Right-handed alpha
Helix 166	AS4	A	3906	3934	Right-handed alpha
Helix 167	AS5	A	3936	3941	Right-handed alpha
Helix 168	AS6	A	3944	3959	Right-handed alpha
Helix 169	AS7	A	3967	3990	Right-handed alpha
Helix 170	AS8	A	4017	4025	Right-handed alpha
Helix 171	AS9	A	4049	4076	Right-handed alpha
Helix 172	AT1	A	4085	4095	Right-handed alpha
Helix 173	AT2	A	4133	4139	Right-handed alpha
Helix 174	AT3	A	4142	4159	Right-handed alpha
Helix 175	AT4	A	4167	4188	Right-handed alpha
Helix 176	AT5	A	4190	4208	Right-handed alpha
Helix 177	AT6	A	4222	4245	Right-handed alpha
Helix 178	AT7	A	4255	4270	Right-handed alpha
Helix 179	AT8	A	4272	4296	Right-handed alpha
Helix 180	AT9	A	4325	4330	Right-handed 310
Helix 181	AU1	A	4331	4348	Right-handed alpha
Helix 182	AU2	A	4351	4360	Right-handed alpha
Helix 183	AU3	A	4363	4379	Right-handed alpha
Helix 184	AU4	A	4379	4385	Right-handed alpha
Helix 185	AU5	A	4393	4407	Right-handed alpha
Helix 186	AU6	A	4412	4424	Right-handed alpha
Helix 187	AU7	A	4441	4457	Right-handed alpha
Helix 188	AU8	A	4459	4461	Right-handed 310
Helix 189	AU9	A	4462	4471	Right-handed alpha
Helix 190	AV1	A	4472	4476	Right-handed 310
Helix 191	AV2	A	4575	4597	Right-handed alpha
Helix 192	AV3	A	4597	4605	Right-handed alpha
Helix 193	AV4	A	4611	4632	Right-handed alpha
Helix 194	AV5	A	4634	4652	Right-handed alpha
Helix 195	AV6	A	4670	4706	Right-handed alpha
Helix 196	AV7	A	4712	4720	Right-handed alpha
Helix 197	AV8	A	4721	4725	Right-handed 310
Helix 198	AV9	A	4748	4759	Right-handed alpha
Helix 199	AW1	A	4760	4765	Right-handed alpha
Helix 200	AW2	A	4765	4774	Right-handed alpha
Helix 201	AW3	A	4774	4779	Right-handed alpha
Helix 202	AW4	A	4780	4782	Right-handed 310
Helix 203	AW5	A	4783	4798	Right-handed alpha
Helix 204	AW6	A	4809	4815	Right-handed alpha
Helix 205	AW7	A	4818	4839	Right-handed alpha
Helix 206	AW8	A	4839	4846	Right-handed alpha
Helix 207	AW9	A	4854	4858	Right-handed 310
Helix 208	AX1	A	4877	4903	Right-handed alpha
Helix 209	AX2	A	4928	4935	Right-handed alpha
Helix 210	AX3	A	4952	4961	Right-handed alpha
Helix 211	AX4	A	4986	4998	Right-handed alpha
Helix 212	AX5	A	5004	5015	Right-handed alpha
Helix 213	AX6	A	5017	5038	Right-handed alpha
Helix 214	AX7	A	5045	5052	Right-handed alpha
Helix 215	AX8	A	5062	5067	Right-handed alpha
Helix 216	AX9	A	5071	5073	Right-handed 310
Helix 217	AY1	A	5074	5093	Right-handed alpha
Helix 218	AY2	A	5102	5107	Right-handed 310
Helix 219	AY3	A	5110	5123	Right-handed alpha
Helix 220	AY4	A	5125	5141	Right-handed alpha
Helix 221	AY5	A	5159	5169	Right-handed alpha
Helix 222	AY6	A	5175	5181	Right-handed alpha
Helix 223	AY7	A	5186	5188	Right-handed 310
Helix 224	AY8	A	5189	5205	Right-handed alpha

There are 20 sheets in PDB entry 8S24. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	421	427	first strand
Strand 2	A	430	439	anti-parallel
Strand 3	A	379	386	anti-parallel
Strand 4	A	491	494	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	401	404	first strand
Strand 2	A	450	453	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1578	1580	first strand
Strand 2	A	1563	1567	anti-parallel
Strand 3	A	1545	1548	anti-parallel
Strand 4	A	1638	1646	anti-parallel
Strand 5	A	1649	1654	anti-parallel
Strand 6	A	1663	1665	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1862	1864	first strand
Strand 2	A	1891	1895	parallel
Strand 3	A	1925	1931	parallel
Strand 4	A	1830	1835	parallel
Strand 5	A	1947	1948	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2020	2025	first strand
Strand 2	A	2052	2058	parallel
Strand 3	A	2093	2100	parallel
Strand 4	A	1986	1991	parallel
Strand 5	A	2129	2131	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2078	2080	first strand
Strand 2	A	2086	2088	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2305	2308	first strand
Strand 2	A	2315	2318	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2321	2324	first strand
Strand 2	A	2329	2333	anti-parallel
Strand 3	A	2340	2347	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2446	2450	first strand
Strand 2	A	2482	2487	parallel
Strand 3	A	2518	2524	parallel
Strand 4	A	2416	2419	parallel
Strand 5	A	2580	2581	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2506	2507	first strand
Strand 2	A	2510	2511	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2555	2556	first strand
Strand 2	A	2559	2560	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2801	2808	first strand
Strand 2	A	2837	2844	parallel
Strand 3	A	2880	2885	parallel
Strand 4	A	2765	2768	parallel
Strand 5	A	2898	2901	parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3067	3069	first strand
Strand 2	A	3100	3102	parallel
Strand 3	A	3148	3153	parallel
Strand 4	A	3041	3046	parallel
Strand 5	A	3169	3173	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3121	3123	first strand
Strand 2	A	3126	3133	anti-parallel
Strand 3	A	3136	3142	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3345	3348	first strand
Strand 2	A	3372	3380	parallel
Strand 3	A	3411	3419	parallel
Strand 4	A	3313	3320	parallel
Strand 5	A	3438	3441	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3547	3549	first strand
Strand 2	A	3693	3695	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	4008	4009	first strand
Strand 2	A	4015	4016	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	4097	4099	first strand
Strand 2	A	4112	4114	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	4130	4131	first strand
Strand 2	A	4937	4941	anti-parallel
Strand 3	A	4948	4951	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	4503	4504	first strand
Strand 2	A	4510	4511	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8S24

Analysis of interatomic Contacts of Structural Units in PDB entry:
8S24