Analysis of interatomic Contacts of Structural Units in PDB entry:
8S5T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8S5T entry

There are 2 chains in PDB entry 8S5T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
D
 ALA 70HIS 318
A
 LYS 67HIS 159
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 8S5T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
D
72 113Right-handed alpha
Helix 2
AA2
D
115 139Right-handed alpha
Helix 3
AA3
D
151 174Right-handed alpha
Helix 4
AA4
D
183 196Right-handed alpha
Helix 5
AA5
D
197 199Right-handed 310
Helix 6
AA6
D
204 216Right-handed alpha
Helix 7
AA7
D
225 243Right-handed alpha
Helix 8
AA8
D
246 271Right-handed alpha
Helix 9
AA9
D
279 283Right-handed 310
Helix 10
AB1
D
284 300Right-handed alpha
Helix 11
AB2
D
300 314Right-handed alpha
Helix 12
AB3
A
72 76Right-handed 310
Helix 13
AB4
A
86 88Right-handed 310
Helix 14
AB5
A
102 112Right-handed alpha
Helix 15
AB6
A
115 120Right-handed alpha
Helix 16
AB7
A
121 135Right-handed alpha
Helix 17
AB8
A
136 156Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8S5T.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 91first strand
Strand 2
A
95 96anti-parallel
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