Analysis of interatomic Contacts of Structural Units in PDB entry:
8S6B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8S6B entry

There is 1 chain in PDB entry 8S6B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 439HIS 861
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 8S6B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
444 454Right-handed alpha
Helix 2
AA2
A
463 473Right-handed alpha
Helix 3
AA3
A
477 479Right-handed 310
Helix 4
AA4
A
480 485Right-handed alpha
Helix 5
AA5
A
487 502Right-handed alpha
Helix 6
AA6
A
507 512Right-handed 310
Helix 7
AA7
A
561 576Right-handed alpha
Helix 8
AA8
A
598 611Right-handed alpha
Helix 9
AA9
A
611 624Right-handed alpha
Helix 10
AB1
A
656 675Right-handed alpha
Helix 11
AB2
A
694 701Right-handed alpha
Helix 12
AB3
A
713 720Right-handed alpha
Helix 13
AB4
A
724 737Right-handed alpha
Helix 14
AB5
A
737 743Right-handed alpha
Helix 15
AB6
A
752 764Right-handed alpha
Helix 16
AB7
A
767 769Right-handed 310
Helix 17
AB8
A
770 775Right-handed alpha
Helix 18
AB9
A
806 810Right-handed 310
Helix 19
AC1
A
811 821Right-handed alpha
Helix 20
AC2
A
832 860Right-handed alpha
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There are 3 sheets in PDB entry 8S6B. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
538 546first strand
Strand 2
A
549 556anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
630 631first strand
Strand 2
A
642 650anti-parallel
Strand 3
A
593 595anti-parallel
Strand 4
A
679 682anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
635 639first strand
Strand 2
A
642 650anti-parallel
Strand 3
A
580 590anti-parallel
Strand 4
A
703 712anti-parallel
Strand 5
A
790 800anti-parallel
Strand 6
A
777 784anti-parallel
Strand 7
A
748 749parallel
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