Analysis of interatomic Contacts of Structural Units in PDB entry:
8S6G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8S6G entry

There is 1 chain in PDB entry 8S6G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 35SER 509
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 8S6G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
35 44Right-handed alpha
Helix 2
AA2
A
48 50Right-handed 310
Helix 3
AA3
A
59 64Right-handed alpha
Helix 4
AA4
A
83 98Right-handed alpha
Helix 5
AA5
A
112 116Right-handed 310
Helix 6
AA6
A
148 161Right-handed alpha
Helix 7
AA7
A
173 179Right-handed alpha
Helix 8
AA8
A
186 191Right-handed alpha
Helix 9
AA9
A
192 196Right-handed alpha
Helix 10
AB1
A
217 228Right-handed alpha
Helix 11
AB2
A
229 231Right-handed 310
Helix 12
AB3
A
260 278Right-handed alpha
Helix 13
AB4
A
302 304Right-handed 310
Helix 14
AB5
A
305 315Right-handed alpha
Helix 15
AB6
A
330 338Right-handed alpha
Helix 16
AB7
A
367 378Right-handed alpha
Helix 17
AB8
A
379 382Right-handed 310
Helix 18
AB9
A
397 403Right-handed 310
Helix 19
AC1
A
404 408Right-handed 310
Helix 20
AC2
A
435 454Right-handed alpha
Helix 21
AC3
A
470 480Right-handed alpha
Helix 22
AC4
A
482 494Right-handed alpha
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There are 3 sheets in PDB entry 8S6G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 53first strand
Strand 2
A
77 79anti-parallel
Strand 3
A
122 125parallel
Strand 4
A
101 104parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 135first strand
Strand 2
A
140 144anti-parallel
Strand 3
A
233 240anti-parallel
Strand 4
A
197 203anti-parallel
Strand 5
A
209 213anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
322 329first strand
Strand 2
A
248 255anti-parallel
Strand 3
A
294 299anti-parallel
Strand 4
A
283 288anti-parallel
Strand 5
A
387 395anti-parallel
Strand 6
A
415 425anti-parallel
Strand 7
A
353 361anti-parallel
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