Analysis of interatomic Contacts of Structural Units in PDB entry:
8S70

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8S70 entry

There are 2 chains in PDB entry 8S70 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
D	GLY 1	ALA 328
T	T 33	T 36

There are 12 helices in PDB entry 8S70. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	D	1	21	Right-handed alpha
Helix 2	AA2	D	22	25	Right-handed 310
Helix 3	AA3	D	43	50	Right-handed alpha
Helix 4	AA4	D	70	86	Right-handed alpha
Helix 5	AA5	D	99	106	Right-handed alpha
Helix 6	AA6	D	120	135	Right-handed alpha
Helix 7	AA7	D	150	156	Right-handed alpha
Helix 8	AA8	D	165	185	Right-handed alpha
Helix 9	AA9	D	212	218	Right-handed alpha
Helix 10	AB1	D	268	280	Right-handed alpha
Helix 11	AB2	D	300	310	Right-handed alpha
Helix 12	AB3	D	311	327	Right-handed alpha

There are 3 sheets in PDB entry 8S70. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	38	39	first strand
Strand 2	D	55	56	anti-parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	89	93	first strand
Strand 2	D	139	143	parallel
Strand 3	D	187	192	parallel
Strand 4	D	60	64	parallel
Strand 5	D	220	231	parallel
Strand 6	D	236	248	anti-parallel
Strand 7	D	257	262	anti-parallel
Strand 8	D	266	267	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	285	286	first strand
Strand 2	D	289	290	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8S70

Analysis of interatomic Contacts of Structural Units in PDB entry:
8S70