Analysis of interatomic Contacts of Structural Units in PDB entry:
8S78


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8S78 entry

There is 1 chain in PDB entry 8S78 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 159PRO 296
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 8S78. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
168 170Right-handed 310
Helix 2
AA2
A
171 183Right-handed alpha
Helix 3
AA3
A
194 198Right-handed alpha
Helix 4
AA4
A
210 215Right-handed alpha
Helix 5
AA5
A
224 229Right-handed alpha
Helix 6
AA6
A
230 244Right-handed alpha
Helix 7
AA7
A
281 295Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8S78.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 193first strand
Strand 2
A
161 165parallel
Strand 3
A
216 223parallel
Strand 4
A
252 256parallel
Strand 5
A
274 275parallel
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