Analysis of interatomic Contacts of Structural Units in PDB entry:
8S7Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8S7Z entry

There are 2 chains in PDB entry 8S7Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2GLU 434
B
 MET 1GLN 355
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 8S7Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 16Right-handed alpha
Helix 2
AA2
A
20 40Right-handed alpha
Helix 3
AA3
A
46 63Right-handed alpha
Helix 4
AA4
A
103 112Right-handed alpha
Helix 5
AA5
A
155 162Right-handed alpha
Helix 6
AA6
A
177 185Right-handed alpha
Helix 7
AA7
A
222 234Right-handed alpha
Helix 8
AA8
A
260 276Right-handed alpha
Helix 9
AA9
A
290 306Right-handed alpha
Helix 10
AB1
A
310 317Right-handed 310
Helix 11
AB2
A
319 341Right-handed alpha
Helix 12
AB3
A
382 390Right-handed alpha
Helix 13
AB4
A
418 432Right-handed alpha
Helix 14
AB5
B
6 16Right-handed alpha
Helix 15
AB6
B
20 40Right-handed alpha
Helix 16
AB7
B
46 63Right-handed alpha
Helix 17
AB8
B
103 112Right-handed alpha
Helix 18
AB9
B
155 162Right-handed alpha
Helix 19
AC1
B
177 185Right-handed alpha
Helix 20
AC2
B
222 234Right-handed alpha
Helix 21
AC3
B
260 276Right-handed alpha
Helix 22
AC4
B
290 306Right-handed alpha
Helix 23
AC5
B
310 317Right-handed 310
Helix 24
AC6
B
319 341Right-handed alpha
Helix 25
AC7
B
382 390Right-handed alpha
Helix 26
AC8
B
418 432Right-handed alpha
Helix 27
AC9
C
6 16Right-handed alpha
Helix 28
AD1
C
20 40Right-handed alpha
Helix 29
AD2
C
46 63Right-handed alpha
Helix 30
AD3
C
103 112Right-handed alpha
Helix 31
AD4
C
155 162Right-handed alpha
Helix 32
AD5
C
177 185Right-handed alpha
Helix 33
AD6
C
222 234Right-handed alpha
Helix 34
AD7
C
260 276Right-handed alpha
Helix 35
AD8
C
290 306Right-handed alpha
Helix 36
AD9
C
310 317Right-handed 310
Helix 37
AE1
C
319 341Right-handed alpha
Helix 38
AE2
C
382 390Right-handed alpha
Helix 39
AE3
C
418 432Right-handed alpha
Helix 40
AE4
D
6 16Right-handed alpha
Helix 41
AE5
D
20 40Right-handed alpha
Helix 42
AE6
D
46 63Right-handed alpha
Helix 43
AE7
D
103 112Right-handed alpha
Helix 44
AE8
D
156 162Right-handed alpha
Helix 45
AE9
D
177 185Right-handed alpha
Helix 46
AF1
D
222 234Right-handed alpha
Helix 47
AF2
D
260 276Right-handed alpha
Helix 48
AF3
D
290 306Right-handed alpha
Helix 49
AF4
D
310 317Right-handed 310
Helix 50
AF5
D
319 341Right-handed alpha
Helix 51
AF6
D
382 390Right-handed alpha
Helix 52
AF7
D
418 432Right-handed alpha
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There are 4 sheets in PDB entry 8S7Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 45first strand
Strand 2
A
115 120anti-parallel
Strand 3
A
73 77parallel
Strand 4
A
167 172parallel
Strand 5
A
215 220anti-parallel
Strand 6
A
187 190anti-parallel
Strand 7
A
395 403anti-parallel
Strand 8
A
406 413anti-parallel
Strand 9
A
346 349anti-parallel
Strand 10
A
247 250parallel
Strand 11
A
280 282parallel
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There are 11 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
44 45first strand
Strand 2
B
115 120anti-parallel
Strand 3
B
73 77parallel
Strand 4
B
167 172parallel
Strand 5
B
215 220anti-parallel
Strand 6
B
187 190anti-parallel
Strand 7
B
395 403anti-parallel
Strand 8
B
406 413anti-parallel
Strand 9
B
346 349anti-parallel
Strand 10
B
247 250parallel
Strand 11
B
280 282parallel
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There are 11 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
44 45first strand
Strand 2
C
115 120anti-parallel
Strand 3
C
73 77parallel
Strand 4
C
167 172parallel
Strand 5
C
215 220anti-parallel
Strand 6
C
187 190anti-parallel
Strand 7
C
395 403anti-parallel
Strand 8
C
406 413anti-parallel
Strand 9
C
346 349anti-parallel
Strand 10
C
247 250parallel
Strand 11
C
280 282parallel
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There are 11 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
44 45first strand
Strand 2
D
115 120anti-parallel
Strand 3
D
73 77parallel
Strand 4
D
167 172parallel
Strand 5
D
215 220anti-parallel
Strand 6
D
187 190anti-parallel
Strand 7
D
395 403anti-parallel
Strand 8
D
406 413anti-parallel
Strand 9
D
346 349anti-parallel
Strand 10
D
247 250parallel
Strand 11
D
280 282parallel
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