Analysis of interatomic Contacts of Structural Units in PDB entry:
8SA1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8SA1 entry

There is 1 chain in PDB entry 8SA1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 37GLN 1274
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 8SA1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
44 84Right-handed alpha
Helix 2
AA2
A
107 158Right-handed alpha
Helix 3
AA3
A
159 166Right-handed alpha
Helix 4
AA4
A
167 188Right-handed alpha
Helix 5
AA5
A
188 211Right-handed alpha
Helix 6
AA6
A
212 260Right-handed alpha
Helix 7
AA7
A
260 268Right-handed alpha
Helix 8
AA8
A
269 323Right-handed alpha
Helix 9
AA9
A
327 348Right-handed alpha
Helix 10
AB1
A
348 371Right-handed alpha
Helix 11
AB2
A
433 441Right-handed alpha
Helix 12
AB3
A
462 469Right-handed alpha
Helix 13
AB4
A
483 492Right-handed alpha
Helix 14
AB5
A
493 496Right-handed 310
Helix 15
AB6
A
497 507Right-handed alpha
Helix 16
AB7
A
510 516Right-handed alpha
Helix 17
AB8
A
525 529Right-handed 310
Helix 18
AB9
A
532 548Right-handed alpha
Helix 19
AC1
A
563 576Right-handed alpha
Helix 20
AC2
A
588 594Right-handed alpha
Helix 21
AC3
A
611 619Right-handed alpha
Helix 22
AC4
A
620 630Right-handed alpha
Helix 23
AC5
A
703 708Right-handed alpha
Helix 24
AC6
A
710 741Right-handed alpha
Helix 25
AC7
A
747 798Right-handed alpha
Helix 26
AC8
A
800 805Right-handed alpha
Helix 27
AC9
A
806 809Right-handed 310
Helix 28
AD1
A
810 820Right-handed alpha
Helix 29
AD2
A
821 853Right-handed alpha
Helix 30
AD3
A
855 903Right-handed alpha
Helix 31
AD4
A
903 911Right-handed alpha
Helix 32
AD5
A
912 966Right-handed alpha
Helix 33
AD6
A
970 995Right-handed alpha
Helix 34
AD7
A
997 1014Right-handed alpha
Helix 35
AD8
A
1075 1084Right-handed alpha
Helix 36
AD9
A
1106 1112Right-handed alpha
Helix 37
AE1
A
1126 1133Right-handed alpha
Helix 38
AE2
A
1141 1152Right-handed alpha
Helix 39
AE3
A
1153 1161Right-handed alpha
Helix 40
AE4
A
1163 1167Right-handed 310
Helix 41
AE5
A
1177 1193Right-handed alpha
Helix 42
AE6
A
1207 1221Right-handed alpha
Helix 43
AE7
A
1233 1240Right-handed alpha
Helix 44
AE8
A
1256 1263Right-handed alpha
Helix 45
AE9
A
1265 1274Right-handed alpha
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There are 6 sheets in PDB entry 8SA1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
410 411first strand
Strand 2
A
392 399anti-parallel
Strand 3
A
414 417anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
410 411first strand
Strand 2
A
392 399anti-parallel
Strand 3
A
448 453anti-parallel
Strand 4
A
456 457anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
423 426first strand
Strand 2
A
597 600parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
470 473first strand
Strand 2
A
551 554parallel
Strand 3
A
581 584parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1056 1060first strand
Strand 2
A
1035 1041anti-parallel
Strand 3
A
1091 1096anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1113 1115first strand
Strand 2
A
1196 1200parallel
Strand 3
A
1226 1230parallel
Strand 4
A
1066 1069parallel
Strand 5
A
1242 1245parallel
Strand 6
A
1254 1255anti-parallel
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