Analysis of interatomic Contacts of Structural Units in PDB entry:
8SC0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8SC0 entry

There are 4 chains in PDB entry 8SC0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 4ALA 251
B
 LEU 4ALA 251
C
 LEU 4ALA 251
D
 LEU 4ALA 251
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 8SC0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 31Right-handed alpha
Helix 2
AA2
A
58 71Right-handed alpha
Helix 3
AA3
A
90 94Right-handed 310
Helix 4
AA4
A
95 107Right-handed alpha
Helix 5
AA5
A
107 125Right-handed alpha
Helix 6
AA6
A
134 138Right-handed 310
Helix 7
AA7
A
144 167Right-handed alpha
Helix 8
AA8
A
185 189Right-handed 310
Helix 9
AA9
A
196 201Right-handed alpha
Helix 10
AB1
A
202 206Right-handed 310
Helix 11
AB2
A
217 230Right-handed alpha
Helix 12
AB3
A
231 234Right-handed 310
Helix 13
AB4
B
18 31Right-handed alpha
Helix 14
AB5
B
58 71Right-handed alpha
Helix 15
AB6
B
95 107Right-handed alpha
Helix 16
AB7
B
107 125Right-handed alpha
Helix 17
AB8
B
134 138Right-handed 310
Helix 18
AB9
B
144 166Right-handed alpha
Helix 19
AC1
B
167 169Right-handed 310
Helix 20
AC2
B
196 201Right-handed alpha
Helix 21
AC3
B
202 206Right-handed 310
Helix 22
AC4
B
217 230Right-handed alpha
Helix 23
AC5
B
231 234Right-handed 310
Helix 24
AC6
C
18 31Right-handed alpha
Helix 25
AC7
C
58 73Right-handed alpha
Helix 26
AC8
C
95 107Right-handed alpha
Helix 27
AC9
C
107 125Right-handed alpha
Helix 28
AD1
C
134 138Right-handed 310
Helix 29
AD2
C
144 167Right-handed alpha
Helix 30
AD3
C
194 200Right-handed alpha
Helix 31
AD4
C
203 206Right-handed 310
Helix 32
AD5
C
217 230Right-handed alpha
Helix 33
AD6
C
231 234Right-handed 310
Helix 34
AD7
D
18 31Right-handed alpha
Helix 35
AD8
D
58 71Right-handed alpha
Helix 36
AD9
D
90 94Right-handed 310
Helix 37
AE1
D
95 107Right-handed alpha
Helix 38
AE2
D
107 125Right-handed alpha
Helix 39
AE3
D
134 138Right-handed 310
Helix 40
AE4
D
144 167Right-handed alpha
Helix 41
AE5
D
194 200Right-handed alpha
Helix 42
AE6
D
203 206Right-handed 310
Helix 43
AE7
D
217 230Right-handed alpha
Helix 44
AE8
D
231 234Right-handed 310
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There are 6 sheets in PDB entry 8SC0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 53first strand
Strand 2
A
34 39parallel
Strand 3
A
10 14parallel
Strand 4
A
78 81parallel
Strand 5
A
128 132parallel
Strand 6
A
171 177parallel
Strand 7
A
240 243parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
50 53first strand
Strand 2
B
34 39parallel
Strand 3
B
10 14parallel
Strand 4
B
78 81parallel
Strand 5
B
128 132parallel
Strand 6
B
171 177parallel
Strand 7
B
240 243parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
50 53first strand
Strand 2
C
34 39parallel
Strand 3
C
10 14parallel
Strand 4
C
78 81parallel
Strand 5
C
128 132parallel
Strand 6
C
171 177parallel
Strand 7
C
240 243parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
201 202first strand
Strand 2
C
207 208anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
50 53first strand
Strand 2
D
34 39parallel
Strand 3
D
10 14parallel
Strand 4
D
78 81parallel
Strand 5
D
128 132parallel
Strand 6
D
171 177parallel
Strand 7
D
240 243parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
201 202first strand
Strand 2
D
207 208anti-parallel
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