Analysis of interatomic Contacts of Structural Units in PDB entry:
8SD3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8SD3 entry

There are 4 chains in PDB entry 8SD3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 171ARG 428
B
 LEU 171ARG 428
C
 LEU 171ARG 428
D
 LEU 171ARG 428
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 8SD3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
172 177Right-handed alpha
Helix 2
AA2
A
178 180Right-handed 310
Helix 3
AA3
A
181 205Right-handed alpha
Helix 4
AA4
A
224 246Right-handed alpha
Helix 5
AA5
A
251 256Right-handed alpha
Helix 6
AA6
A
256 265Right-handed alpha
Helix 7
AA7
A
266 277Right-handed alpha
Helix 8
AA8
A
289 298Right-handed alpha
Helix 9
AA9
A
299 309Right-handed 310
Helix 10
AB1
A
310 323Right-handed alpha
Helix 11
AB2
A
323 350Right-handed alpha
Helix 12
AB3
A
359 372Right-handed alpha
Helix 13
AB4
A
383 403Right-handed alpha
Helix 14
AB5
A
404 428Right-handed alpha
Helix 15
AB6
B
172 177Right-handed alpha
Helix 16
AB7
B
178 180Right-handed 310
Helix 17
AB8
B
181 205Right-handed alpha
Helix 18
AB9
B
224 246Right-handed alpha
Helix 19
AC1
B
251 256Right-handed alpha
Helix 20
AC2
B
256 265Right-handed alpha
Helix 21
AC3
B
266 277Right-handed alpha
Helix 22
AC4
B
289 298Right-handed alpha
Helix 23
AC5
B
299 309Right-handed 310
Helix 24
AC6
B
310 323Right-handed alpha
Helix 25
AC7
B
323 350Right-handed alpha
Helix 26
AC8
B
359 372Right-handed alpha
Helix 27
AC9
B
383 403Right-handed alpha
Helix 28
AD1
B
404 428Right-handed alpha
Helix 29
AD2
C
172 177Right-handed alpha
Helix 30
AD3
C
178 180Right-handed 310
Helix 31
AD4
C
181 205Right-handed alpha
Helix 32
AD5
C
224 246Right-handed alpha
Helix 33
AD6
C
251 256Right-handed alpha
Helix 34
AD7
C
256 265Right-handed alpha
Helix 35
AD8
C
266 277Right-handed alpha
Helix 36
AD9
C
289 298Right-handed alpha
Helix 37
AE1
C
299 309Right-handed 310
Helix 38
AE2
C
310 323Right-handed alpha
Helix 39
AE3
C
323 350Right-handed alpha
Helix 40
AE4
C
359 372Right-handed alpha
Helix 41
AE5
C
383 403Right-handed alpha
Helix 42
AE6
C
404 428Right-handed alpha
Helix 43
AE7
D
172 177Right-handed alpha
Helix 44
AE8
D
178 180Right-handed 310
Helix 45
AE9
D
181 205Right-handed alpha
Helix 46
AF1
D
224 246Right-handed alpha
Helix 47
AF2
D
251 256Right-handed alpha
Helix 48
AF3
D
256 265Right-handed alpha
Helix 49
AF4
D
266 277Right-handed alpha
Helix 50
AF5
D
289 298Right-handed alpha
Helix 51
AF6
D
299 309Right-handed 310
Helix 52
AF7
D
310 323Right-handed alpha
Helix 53
AF8
D
323 350Right-handed alpha
Helix 54
AF9
D
359 372Right-handed alpha
Helix 55
AG1
D
383 403Right-handed alpha
Helix 56
AG2
D
404 428Right-handed alpha
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There are no sheets in PDB entry 8SD3
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