Analysis of interatomic Contacts of Structural Units in PDB entry:
8SDA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8SDA entry

There are 4 chains in PDB entry 8SDA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 171ARG 428
B
 LEU 171ARG 428
D
 LEU 171LYS 427
C
 TRP 172LYS 427
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 8SDA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
171 176Right-handed alpha
Helix 2
AA2
A
181 206Right-handed alpha
Helix 3
AA3
A
224 247Right-handed alpha
Helix 4
AA4
A
250 256Right-handed alpha
Helix 5
AA5
A
256 276Right-handed alpha
Helix 6
AA6
A
289 299Right-handed alpha
Helix 7
AA7
A
300 308Right-handed 310
Helix 8
AA8
A
310 323Right-handed alpha
Helix 9
AA9
A
323 350Right-handed alpha
Helix 10
AB1
A
359 373Right-handed alpha
Helix 11
AB2
A
383 403Right-handed alpha
Helix 12
AB3
A
404 428Right-handed alpha
Helix 13
AB4
B
172 177Right-handed alpha
Helix 14
AB5
B
181 205Right-handed alpha
Helix 15
AB6
B
224 247Right-handed alpha
Helix 16
AB7
B
250 256Right-handed alpha
Helix 17
AB8
B
256 276Right-handed alpha
Helix 18
AB9
B
289 299Right-handed alpha
Helix 19
AC1
B
300 308Right-handed 310
Helix 20
AC2
B
310 323Right-handed alpha
Helix 21
AC3
B
323 349Right-handed alpha
Helix 22
AC4
B
359 372Right-handed alpha
Helix 23
AC5
B
383 400Right-handed alpha
Helix 24
AC6
B
404 428Right-handed alpha
Helix 25
AC7
D
172 176Right-handed alpha
Helix 26
AC8
D
181 206Right-handed alpha
Helix 27
AC9
D
225 229Right-handed alpha
Helix 28
AD1
D
230 244Right-handed alpha
Helix 29
AD2
D
250 256Right-handed alpha
Helix 30
AD3
D
256 275Right-handed alpha
Helix 31
AD4
D
289 299Right-handed alpha
Helix 32
AD5
D
300 308Right-handed 310
Helix 33
AD6
D
310 349Right-handed alpha
Helix 34
AD7
D
359 372Right-handed alpha
Helix 35
AD8
D
383 403Right-handed alpha
Helix 36
AD9
D
403 427Right-handed alpha
Helix 37
AE1
C
181 205Right-handed alpha
Helix 38
AE2
C
224 247Right-handed alpha
Helix 39
AE3
C
250 256Right-handed alpha
Helix 40
AE4
C
256 276Right-handed alpha
Helix 41
AE5
C
289 299Right-handed alpha
Helix 42
AE6
C
300 308Right-handed 310
Helix 43
AE7
C
310 323Right-handed alpha
Helix 44
AE8
C
323 349Right-handed alpha
Helix 45
AE9
C
359 372Right-handed alpha
Helix 46
AF1
C
383 403Right-handed alpha
Helix 47
AF2
C
403 427Right-handed alpha
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There are no sheets in PDB entry 8SDA
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