Analysis of interatomic Contacts of Structural Units in PDB entry:
8SDX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8SDX entry

There are 6 chains in PDB entry 8SDX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 951ARG 1085
B
 PRO 951ARG 1085
C
 CYS 1GLY 4
C
 GLY 6GLY 7
D
 CYS 1GLY 4
D
 GLY 6GLY 7
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 8SDX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
951 977Right-handed alpha
Helix 2
AA2
A
978 984Right-handed 310
Helix 3
AA3
A
994 999Right-handed alpha
Helix 4
AA4
A
1004 1014Right-handed alpha
Helix 5
AA5
A
1019 1038Right-handed alpha
Helix 6
AA6
A
1042 1067Right-handed alpha
Helix 7
AA7
A
1068 1083Right-handed alpha
Helix 8
AA8
B
953 976Right-handed alpha
Helix 9
AA9
B
977 984Right-handed 310
Helix 10
AB1
B
994 999Right-handed alpha
Helix 11
AB2
B
1004 1014Right-handed alpha
Helix 12
AB3
B
1019 1038Right-handed alpha
Helix 13
AB4
B
1042 1067Right-handed alpha
Helix 14
AB5
B
1068 1083Right-handed alpha
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There are no sheets in PDB entry 8SDX
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