Analysis of interatomic Contacts of Structural Units in PDB entry:
8SFT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8SFT entry

There are 4 chains in PDB entry 8SFT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 11LEU 437
B
 GLY 10LEU 437
C
 LYS 11LEU 437
D
 LYS 11LYS 11
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 99 helices in PDB entry 8SFT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 39Right-handed alpha
Helix 2
AA2
A
48 50Right-handed 310
Helix 3
AA3
A
51 58Right-handed alpha
Helix 4
AA4
A
66 69Right-handed 310
Helix 5
AA5
A
78 81Right-handed 310
Helix 6
AA6
A
82 96Right-handed alpha
Helix 7
AA7
A
97 106Right-handed alpha
Helix 8
AA8
A
111 117Right-handed 310
Helix 9
AA9
A
118 133Right-handed alpha
Helix 10
AB1
A
145 150Right-handed 310
Helix 11
AB2
A
162 167Right-handed 310
Helix 12
AB3
A
181 210Right-handed alpha
Helix 13
AB4
A
229 233Right-handed 310
Helix 14
AB5
A
234 238Right-handed 310
Helix 15
AB6
A
262 266Right-handed 310
Helix 16
AB7
A
280 283Right-handed 310
Helix 17
AB8
A
284 296Right-handed alpha
Helix 18
AB9
A
309 313Right-handed 310
Helix 19
AC1
A
326 331Right-handed alpha
Helix 20
AC2
A
332 334Right-handed 310
Helix 21
AC3
A
342 352Right-handed alpha
Helix 22
AC4
A
363 375Right-handed alpha
Helix 23
AC5
A
387 401Right-handed alpha
Helix 24
AC6
A
401 418Right-handed alpha
Helix 25
AC7
A
419 435Right-handed alpha
Helix 26
AC8
B
22 39Right-handed alpha
Helix 27
AC9
B
48 50Right-handed 310
Helix 28
AD1
B
51 58Right-handed alpha
Helix 29
AD2
B
66 69Right-handed 310
Helix 30
AD3
B
78 81Right-handed 310
Helix 31
AD4
B
82 96Right-handed alpha
Helix 32
AD5
B
97 106Right-handed alpha
Helix 33
AD6
B
111 117Right-handed 310
Helix 34
AD7
B
118 133Right-handed alpha
Helix 35
AD8
B
145 150Right-handed 310
Helix 36
AD9
B
162 167Right-handed 310
Helix 37
AE1
B
181 210Right-handed alpha
Helix 38
AE2
B
229 233Right-handed 310
Helix 39
AE3
B
234 238Right-handed 310
Helix 40
AE4
B
262 266Right-handed 310
Helix 41
AE5
B
280 283Right-handed 310
Helix 42
AE6
B
284 296Right-handed alpha
Helix 43
AE7
B
309 313Right-handed 310
Helix 44
AE8
B
326 331Right-handed alpha
Helix 45
AE9
B
332 334Right-handed 310
Helix 46
AF1
B
342 352Right-handed alpha
Helix 47
AF2
B
363 375Right-handed alpha
Helix 48
AF3
B
387 401Right-handed alpha
Helix 49
AF4
B
401 418Right-handed alpha
Helix 50
AF5
B
419 435Right-handed alpha
Helix 51
AF6
C
22 39Right-handed alpha
Helix 52
AF7
C
48 50Right-handed 310
Helix 53
AF8
C
51 58Right-handed alpha
Helix 54
AF9
C
66 69Right-handed 310
Helix 55
AG1
C
78 80Right-handed 310
Helix 56
AG2
C
81 96Right-handed alpha
Helix 57
AG3
C
97 106Right-handed alpha
Helix 58
AG4
C
111 117Right-handed 310
Helix 59
AG5
C
118 133Right-handed alpha
Helix 60
AG6
C
145 150Right-handed 310
Helix 61
AG7
C
162 167Right-handed 310
Helix 62
AG8
C
181 210Right-handed alpha
Helix 63
AG9
C
229 233Right-handed 310
Helix 64
AH1
C
234 238Right-handed 310
Helix 65
AH2
C
262 266Right-handed 310
Helix 66
AH3
C
280 283Right-handed 310
Helix 67
AH4
C
284 296Right-handed alpha
Helix 68
AH5
C
309 313Right-handed 310
Helix 69
AH6
C
326 331Right-handed alpha
Helix 70
AH7
C
332 334Right-handed 310
Helix 71
AH8
C
342 353Right-handed alpha
Helix 72
AH9
C
363 375Right-handed alpha
Helix 73
AI1
C
387 401Right-handed alpha
Helix 74
AI2
C
401 418Right-handed alpha
Helix 75
AI3
C
419 435Right-handed alpha
Helix 76
AI4
D
22 39Right-handed alpha
Helix 77
AI5
D
48 50Right-handed 310
Helix 78
AI6
D
51 58Right-handed alpha
Helix 79
AI7
D
66 69Right-handed 310
Helix 80
AI8
D
84 96Right-handed alpha
Helix 81
AI9
D
97 102Right-handed alpha
Helix 82
AJ1
D
113 118Right-handed alpha
Helix 83
AJ2
D
118 133Right-handed alpha
Helix 84
AJ3
D
145 150Right-handed 310
Helix 85
AJ4
D
162 167Right-handed 310
Helix 86
AJ5
D
190 210Right-handed alpha
Helix 87
AJ6
D
229 233Right-handed 310
Helix 88
AJ7
D
234 238Right-handed 310
Helix 89
AJ8
D
262 266Right-handed 310
Helix 90
AJ9
D
280 283Right-handed 310
Helix 91
AK1
D
284 296Right-handed alpha
Helix 92
AK2
D
309 313Right-handed 310
Helix 93
AK3
D
326 331Right-handed alpha
Helix 94
AK4
D
332 334Right-handed 310
Helix 95
AK5
D
342 353Right-handed alpha
Helix 96
AK6
D
363 375Right-handed alpha
Helix 97
AK7
D
387 401Right-handed alpha
Helix 98
AK8
D
401 418Right-handed alpha
Helix 99
AK9
D
419 435Right-handed alpha
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There are 8 sheets in PDB entry 8SFT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 64first strand
Strand 2
A
42 47parallel
Strand 3
A
14 19parallel
Strand 4
A
136 140parallel
Strand 5
A
155 159parallel
Strand 6
A
224 227parallel
Strand 7
A
244 247parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
319 322first strand
Strand 2
A
301 305parallel
Strand 3
A
272 275parallel
Strand 4
A
336 339parallel
Strand 5
A
356 358parallel
Strand 6
A
378 380parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
61 64first strand
Strand 2
B
42 47parallel
Strand 3
B
14 19parallel
Strand 4
B
136 140parallel
Strand 5
B
155 159parallel
Strand 6
B
224 227parallel
Strand 7
B
244 247parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
319 322first strand
Strand 2
B
301 305parallel
Strand 3
B
272 275parallel
Strand 4
B
336 339parallel
Strand 5
B
356 358parallel
Strand 6
B
378 380parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
61 64first strand
Strand 2
C
42 47parallel
Strand 3
C
14 19parallel
Strand 4
C
136 140parallel
Strand 5
C
155 159parallel
Strand 6
C
224 227parallel
Strand 7
C
244 247parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
319 322first strand
Strand 2
C
301 305parallel
Strand 3
C
272 275parallel
Strand 4
C
336 339parallel
Strand 5
C
356 358parallel
Strand 6
C
378 380parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
61 64first strand
Strand 2
D
42 47parallel
Strand 3
D
14 19parallel
Strand 4
D
136 140parallel
Strand 5
D
155 159parallel
Strand 6
D
224 227parallel
Strand 7
D
244 247parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
319 322first strand
Strand 2
D
301 305parallel
Strand 3
D
272 275parallel
Strand 4
D
336 339parallel
Strand 5
D
356 358parallel
Strand 6
D
378 380parallel
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