Analysis of interatomic Contacts of Structural Units in PDB entry:
8SG4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8SG4 entry

There is 1 chain in PDB entry 8SG4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 4GLU 1514
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 65 helices in PDB entry 8SG4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 13Right-handed alpha
Helix 2
AA2
A
29 36Right-handed alpha
Helix 3
AA3
A
36 58Right-handed alpha
Helix 4
AA4
A
69 92Right-handed alpha
Helix 5
AA5
A
94 100Right-handed alpha
Helix 6
AA6
A
100 128Right-handed alpha
Helix 7
AA7
A
132 161Right-handed alpha
Helix 8
AA8
A
166 189Right-handed alpha
Helix 9
AA9
A
195 202Right-handed alpha
Helix 10
AB1
A
210 215Right-handed 310
Helix 11
AB2
A
216 223Right-handed alpha
Helix 12
AB3
A
226 236Right-handed alpha
Helix 13
AB4
A
251 270Right-handed alpha
Helix 14
AB5
A
274 327Right-handed alpha
Helix 15
AB6
A
342 392Right-handed alpha
Helix 16
AB7
A
393 399Right-handed alpha
Helix 17
AB8
A
401 411Right-handed alpha
Helix 18
AB9
A
411 424Right-handed alpha
Helix 19
AC1
A
424 445Right-handed alpha
Helix 20
AC2
A
447 493Right-handed alpha
Helix 21
AC3
A
493 501Right-handed alpha
Helix 22
AC4
A
502 517Right-handed alpha
Helix 23
AC5
A
517 555Right-handed alpha
Helix 24
AC6
A
560 579Right-handed alpha
Helix 25
AC7
A
580 603Right-handed alpha
Helix 26
AC8
A
668 677Right-handed alpha
Helix 27
AC9
A
707 713Right-handed alpha
Helix 28
AD1
A
718 729Right-handed alpha
Helix 29
AD2
A
731 738Right-handed alpha
Helix 30
AD3
A
740 743Right-handed 310
Helix 31
AD4
A
754 770Right-handed alpha
Helix 32
AD5
A
779 783Right-handed 310
Helix 33
AD6
A
784 795Right-handed alpha
Helix 34
AD7
A
800 805Right-handed 310
Helix 35
AD8
A
813 819Right-handed alpha
Helix 36
AD9
A
836 842Right-handed alpha
Helix 37
AE1
A
846 854Right-handed alpha
Helix 38
AE2
A
900 913Right-handed alpha
Helix 39
AE3
A
923 929Right-handed 310
Helix 40
AE4
A
935 946Right-handed alpha
Helix 41
AE5
A
947 983Right-handed alpha
Helix 42
AE6
A
987 1016Right-handed alpha
Helix 43
AE7
A
1017 1035Right-handed alpha
Helix 44
AE8
A
1037 1044Right-handed alpha
Helix 45
AE9
A
1045 1063Right-handed alpha
Helix 46
AF1
A
1063 1089Right-handed alpha
Helix 47
AF2
A
1092 1137Right-handed alpha
Helix 48
AF3
A
1138 1146Right-handed alpha
Helix 49
AF4
A
1147 1202Right-handed alpha
Helix 50
AF5
A
1205 1218Right-handed alpha
Helix 51
AF6
A
1218 1237Right-handed alpha
Helix 52
AF7
A
1237 1248Right-handed alpha
Helix 53
AF8
A
1257 1261Right-handed 310
Helix 54
AF9
A
1313 1320Right-handed alpha
Helix 55
AG1
A
1341 1347Right-handed alpha
Helix 56
AG2
A
1363 1368Right-handed alpha
Helix 57
AG3
A
1374 1385Right-handed alpha
Helix 58
AG4
A
1387 1395Right-handed alpha
Helix 59
AG5
A
1397 1400Right-handed 310
Helix 60
AG6
A
1404 1408Right-handed 310
Helix 61
AG7
A
1411 1426Right-handed alpha
Helix 62
AG8
A
1442 1455Right-handed alpha
Helix 63
AG9
A
1467 1471Right-handed 310
Helix 64
AH1
A
1490 1497Right-handed alpha
Helix 65
AH2
A
1500 1509Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 8SG4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
613 615first strand
Strand 2
A
681 690parallel
Strand 3
A
624 637anti-parallel
Strand 4
A
643 654anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
693 696first strand
Strand 2
A
773 777parallel
Strand 3
A
806 810parallel
Strand 4
A
659 662parallel
Strand 5
A
822 827parallel
Strand 6
A
830 835anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
705 706first strand
Strand 2
A
745 746anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1287 1296first strand
Strand 2
A
1272 1280anti-parallel
Strand 3
A
1327 1332anti-parallel
Strand 4
A
1335 1336anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1350 1352first strand
Strand 2
A
1430 1434parallel
Strand 3
A
1460 1464parallel
Strand 4
A
1301 1305parallel
Strand 5
A
1476 1481parallel
Strand 6
A
1484 1489anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1361 1362first strand
Strand 2
A
1402 1403anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il