Analysis of interatomic Contacts of Structural Units in PDB entry:
8SG5

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8SG5 entry

There are 3 chains in PDB entry 8SG5 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 23	ASP 496
B	ALA 23	ASP 496
C	THR 27	ASN 384

There are187 helices in PDB entry 8SG5. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	31	37	Right-handed alpha
Helix 2	AA2	A	49	55	Right-handed 310
Helix 3	AA3	A	56	69	Right-handed alpha
Helix 4	AA4	A	86	95	Right-handed alpha
Helix 5	AA5	A	111	117	Right-handed 310
Helix 6	AA6	A	122	134	Right-handed alpha
Helix 7	AA7	A	135	137	Right-handed 310
Helix 8	AA8	A	138	151	Right-handed alpha
Helix 9	AA9	A	151	166	Right-handed alpha
Helix 10	AB1	A	172	190	Right-handed alpha
Helix 11	AB2	A	194	198	Right-handed 310
Helix 12	AB3	A	201	209	Right-handed alpha
Helix 13	AB4	A	210	213	Right-handed 310
Helix 14	AB5	A	217	226	Right-handed alpha
Helix 15	AB6	A	228	236	Right-handed alpha
Helix 16	AB7	A	242	258	Right-handed alpha
Helix 17	AB8	A	271	278	Right-handed alpha
Helix 18	AB9	A	291	323	Right-handed alpha
Helix 19	AC1	A	324	339	Right-handed alpha
Helix 20	AC2	A	346	352	Right-handed alpha
Helix 21	AC3	A	353	367	Right-handed alpha
Helix 22	AC4	A	397	403	Right-handed alpha
Helix 23	AC5	A	415	420	Right-handed 310
Helix 24	AC6	A	443	461	Right-handed alpha
Helix 25	AC7	B	31	37	Right-handed alpha
Helix 26	AC8	B	49	54	Right-handed 310
Helix 27	AC9	B	56	69	Right-handed alpha
Helix 28	AD1	B	86	95	Right-handed alpha
Helix 29	AD2	B	111	117	Right-handed 310
Helix 30	AD3	B	122	134	Right-handed alpha
Helix 31	AD4	B	135	137	Right-handed 310
Helix 32	AD5	B	138	151	Right-handed alpha
Helix 33	AD6	B	151	165	Right-handed alpha
Helix 34	AD7	B	172	190	Right-handed alpha
Helix 35	AD8	B	201	209	Right-handed alpha
Helix 36	AD9	B	210	213	Right-handed 310
Helix 37	AE1	B	217	226	Right-handed alpha
Helix 38	AE2	B	228	236	Right-handed alpha
Helix 39	AE3	B	242	258	Right-handed alpha
Helix 40	AE4	B	271	278	Right-handed alpha
Helix 41	AE5	B	291	323	Right-handed alpha
Helix 42	AE6	B	324	339	Right-handed alpha
Helix 43	AE7	B	346	353	Right-handed alpha
Helix 44	AE8	B	353	367	Right-handed alpha
Helix 45	AE9	B	397	403	Right-handed alpha
Helix 46	AF1	B	415	420	Right-handed 310
Helix 47	AF2	B	443	461	Right-handed alpha
Helix 48	AF3	C	31	37	Right-handed alpha
Helix 49	AF4	C	49	55	Right-handed 310
Helix 50	AF5	C	56	69	Right-handed alpha
Helix 51	AF6	C	86	95	Right-handed alpha
Helix 52	AF7	C	111	117	Right-handed 310
Helix 53	AF8	C	122	134	Right-handed alpha
Helix 54	AF9	C	135	137	Right-handed 310
Helix 55	AG1	C	138	145	Right-handed alpha
Helix 56	AG2	C	145	165	Right-handed alpha
Helix 57	AG3	C	172	190	Right-handed alpha
Helix 58	AG4	C	201	209	Right-handed alpha
Helix 59	AG5	C	217	226	Right-handed alpha
Helix 60	AG6	C	229	236	Right-handed alpha
Helix 61	AG7	C	242	259	Right-handed alpha
Helix 62	AG8	C	271	278	Right-handed alpha
Helix 63	AG9	C	291	324	Right-handed alpha
Helix 64	AH1	C	324	339	Right-handed alpha
Helix 65	AH2	C	346	353	Right-handed alpha
Helix 66	AH3	C	353	367	Right-handed alpha
Helix 67	AH4	C	397	403	Right-handed alpha
Helix 68	AH5	C	415	420	Right-handed 310
Helix 69	AH6	C	443	461	Right-handed alpha
Helix 70	AH7	D	31	37	Right-handed alpha
Helix 71	AH8	D	49	55	Right-handed 310
Helix 72	AH9	D	56	69	Right-handed alpha
Helix 73	AI1	D	86	95	Right-handed alpha
Helix 74	AI2	D	111	117	Right-handed 310
Helix 75	AI3	D	122	134	Right-handed alpha
Helix 76	AI4	D	135	137	Right-handed 310
Helix 77	AI5	D	138	151	Right-handed alpha
Helix 78	AI6	D	152	165	Right-handed alpha
Helix 79	AI7	D	172	190	Right-handed alpha
Helix 80	AI8	D	201	208	Right-handed alpha
Helix 81	AI9	D	209	211	Right-handed 310
Helix 82	AJ1	D	217	226	Right-handed alpha
Helix 83	AJ2	D	229	236	Right-handed alpha
Helix 84	AJ3	D	242	259	Right-handed alpha
Helix 85	AJ4	D	271	279	Right-handed alpha
Helix 86	AJ5	D	291	323	Right-handed alpha
Helix 87	AJ6	D	324	339	Right-handed alpha
Helix 88	AJ7	D	346	352	Right-handed alpha
Helix 89	AJ8	D	353	367	Right-handed alpha
Helix 90	AJ9	D	397	403	Right-handed alpha
Helix 91	AK1	D	415	420	Right-handed 310
Helix 92	AK2	D	443	461	Right-handed alpha
Helix 93	AK3	E	27	30	Right-handed 310
Helix 94	AK4	E	31	37	Right-handed alpha
Helix 95	AK5	E	49	54	Right-handed 310
Helix 96	AK6	E	56	69	Right-handed alpha
Helix 97	AK7	E	86	95	Right-handed alpha
Helix 98	AK8	E	111	117	Right-handed 310
Helix 99	AK9	E	122	134	Right-handed alpha
Helix 100	AL1	E	135	137	Right-handed 310
Helix 101	AL2	E	138	151	Right-handed alpha
Helix 102	AL3	E	152	165	Right-handed alpha
Helix 103	AL4	E	172	190	Right-handed alpha
Helix 104	AL5	E	194	198	Right-handed 310
Helix 105	AL6	E	201	208	Right-handed alpha
Helix 106	AL7	E	209	213	Right-handed 310
Helix 107	AL8	E	217	226	Right-handed alpha
Helix 108	AL9	E	229	236	Right-handed alpha
Helix 109	AM1	E	242	259	Right-handed alpha
Helix 110	AM2	E	271	278	Right-handed alpha
Helix 111	AM3	E	291	323	Right-handed alpha
Helix 112	AM4	E	324	339	Right-handed alpha
Helix 113	AM5	E	346	352	Right-handed alpha
Helix 114	AM6	E	353	367	Right-handed alpha
Helix 115	AM7	E	397	403	Right-handed alpha
Helix 116	AM8	E	415	420	Right-handed 310
Helix 117	AM9	E	443	461	Right-handed alpha
Helix 118	AN1	F	31	37	Right-handed alpha
Helix 119	AN2	F	49	54	Right-handed 310
Helix 120	AN3	F	56	69	Right-handed alpha
Helix 121	AN4	F	86	95	Right-handed alpha
Helix 122	AN5	F	111	117	Right-handed 310
Helix 123	AN6	F	122	134	Right-handed alpha
Helix 124	AN7	F	135	137	Right-handed 310
Helix 125	AN8	F	138	145	Right-handed alpha
Helix 126	AN9	F	145	151	Right-handed alpha
Helix 127	AO1	F	152	165	Right-handed alpha
Helix 128	AO2	F	172	190	Right-handed alpha
Helix 129	AO3	F	201	209	Right-handed alpha
Helix 130	AO4	F	217	226	Right-handed alpha
Helix 131	AO5	F	228	236	Right-handed alpha
Helix 132	AO6	F	242	259	Right-handed alpha
Helix 133	AO7	F	271	279	Right-handed alpha
Helix 134	AO8	F	291	324	Right-handed alpha
Helix 135	AO9	F	324	339	Right-handed alpha
Helix 136	AP1	F	346	351	Right-handed alpha
Helix 137	AP2	F	353	367	Right-handed alpha
Helix 138	AP3	F	397	403	Right-handed alpha
Helix 139	AP4	F	415	420	Right-handed 310
Helix 140	AP5	F	443	461	Right-handed alpha
Helix 141	AP6	G	31	37	Right-handed alpha
Helix 142	AP7	G	49	54	Right-handed 310
Helix 143	AP8	G	56	69	Right-handed alpha
Helix 144	AP9	G	86	95	Right-handed alpha
Helix 145	AQ1	G	111	117	Right-handed 310
Helix 146	AQ2	G	122	134	Right-handed alpha
Helix 147	AQ3	G	135	137	Right-handed 310
Helix 148	AQ4	G	138	145	Right-handed alpha
Helix 149	AQ5	G	145	151	Right-handed alpha
Helix 150	AQ6	G	151	165	Right-handed alpha
Helix 151	AQ7	G	172	190	Right-handed alpha
Helix 152	AQ8	G	201	208	Right-handed alpha
Helix 153	AQ9	G	209	213	Right-handed 310
Helix 154	AR1	G	217	226	Right-handed alpha
Helix 155	AR2	G	228	236	Right-handed alpha
Helix 156	AR3	G	242	259	Right-handed alpha
Helix 157	AR4	G	271	278	Right-handed alpha
Helix 158	AR5	G	291	323	Right-handed alpha
Helix 159	AR6	G	324	339	Right-handed alpha
Helix 160	AR7	G	346	352	Right-handed alpha
Helix 161	AR8	G	353	367	Right-handed alpha
Helix 162	AR9	G	397	403	Right-handed alpha
Helix 163	AS1	G	415	420	Right-handed 310
Helix 164	AS2	G	443	461	Right-handed alpha
Helix 165	AS3	H	31	36	Right-handed alpha
Helix 166	AS4	H	49	55	Right-handed 310
Helix 167	AS5	H	56	69	Right-handed alpha
Helix 168	AS6	H	86	95	Right-handed alpha
Helix 169	AS7	H	111	117	Right-handed 310
Helix 170	AS8	H	122	133	Right-handed alpha
Helix 171	AS9	H	134	137	Right-handed 310
Helix 172	AT1	H	138	145	Right-handed alpha
Helix 173	AT2	H	145	151	Right-handed alpha
Helix 174	AT3	H	151	165	Right-handed alpha
Helix 175	AT4	H	172	190	Right-handed alpha
Helix 176	AT5	H	201	208	Right-handed alpha
Helix 177	AT6	H	209	213	Right-handed 310
Helix 178	AT7	H	217	226	Right-handed alpha
Helix 179	AT8	H	229	236	Right-handed alpha
Helix 180	AT9	H	242	258	Right-handed alpha
Helix 181	AU1	H	271	278	Right-handed alpha
Helix 182	AU2	H	291	323	Right-handed alpha
Helix 183	AU3	H	324	339	Right-handed alpha
Helix 184	AU4	H	346	352	Right-handed alpha
Helix 185	AU5	H	353	367	Right-handed alpha
Helix 186	AU6	H	397	403	Right-handed alpha
Helix 187	AU7	H	443	460	Right-handed alpha

There are 24 sheets in PDB entry 8SG5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	71	76	first strand
Strand 2	A	79	84	anti-parallel
Strand 3	A	393	396	parallel
Strand 4	A	373	376	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	170	171	first strand
Strand 2	A	489	494	anti-parallel
Strand 3	A	462	465	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	381	382	first strand
Strand 2	A	387	388	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	71	76	first strand
Strand 2	B	79	84	anti-parallel
Strand 3	B	393	396	parallel
Strand 4	B	373	376	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	170	171	first strand
Strand 2	B	489	494	anti-parallel
Strand 3	B	462	465	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	381	382	first strand
Strand 2	B	387	388	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	73	76	first strand
Strand 2	C	79	83	anti-parallel
Strand 3	C	393	396	parallel
Strand 4	C	373	376	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	170	171	first strand
Strand 2	C	489	494	anti-parallel
Strand 3	C	462	465	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	381	383	first strand
Strand 2	C	386	388	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	71	76	first strand
Strand 2	D	79	84	anti-parallel
Strand 3	D	393	396	parallel
Strand 4	D	373	376	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	170	171	first strand
Strand 2	D	489	494	anti-parallel
Strand 3	D	462	465	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	381	383	first strand
Strand 2	D	386	388	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	71	76	first strand
Strand 2	E	79	84	anti-parallel
Strand 3	E	393	396	parallel
Strand 4	E	373	376	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	170	171	first strand
Strand 2	E	489	494	anti-parallel
Strand 3	E	462	465	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	381	382	first strand
Strand 2	E	387	388	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	71	76	first strand
Strand 2	F	79	84	anti-parallel
Strand 3	F	393	396	parallel
Strand 4	F	373	376	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	170	171	first strand
Strand 2	F	489	494	anti-parallel
Strand 3	F	462	465	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	381	383	first strand
Strand 2	F	386	388	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	72	76	first strand
Strand 2	G	79	83	anti-parallel
Strand 3	G	393	396	parallel
Strand 4	G	373	376	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	170	171	first strand
Strand 2	G	489	494	anti-parallel
Strand 3	G	462	465	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	381	382	first strand
Strand 2	G	387	388	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	71	76	first strand
Strand 2	H	79	84	anti-parallel
Strand 3	H	393	396	parallel
Strand 4	H	373	376	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	170	171	first strand
Strand 2	H	489	494	anti-parallel
Strand 3	H	462	465	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	381	382	first strand
Strand 2	H	387	388	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8SG5

Analysis of interatomic Contacts of Structural Units in PDB entry:
8SG5