Analysis of interatomic Contacts of Structural Units in PDB entry:
8SGT

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8SGT entry

There are 3 chains in PDB entry 8SGT (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 17	ILE 935
L	GLN 0	GLY 109
H	GLN 1	SER 121

There are 25 helices in PDB entry 8SGT. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	36	72	Right-handed alpha
Helix 2	AA2	A	98	110	Right-handed alpha
Helix 3	AA3	A	110	124	Right-handed alpha
Helix 4	AA4	A	130	145	Right-handed alpha
Helix 5	AA5	A	145	155	Right-handed alpha
Helix 6	AA6	A	165	189	Right-handed alpha
Helix 7	AA7	A	196	205	Right-handed alpha
Helix 8	AA8	A	205	220	Right-handed alpha
Helix 9	AA9	A	602	607	Right-handed alpha
Helix 10	AB1	A	656	665	Right-handed alpha
Helix 11	AB2	A	708	717	Right-handed alpha
Helix 12	AB3	A	738	754	Right-handed alpha
Helix 13	AB4	A	755	757	Right-handed 310
Helix 14	AB5	A	761	764	Right-handed 310
Helix 15	AB6	A	765	795	Right-handed alpha
Helix 16	AB7	A	797	805	Right-handed alpha
Helix 17	AB8	A	805	811	Right-handed alpha
Helix 18	AB9	A	811	825	Right-handed alpha
Helix 19	AC1	A	828	845	Right-handed alpha
Helix 20	AC2	A	845	861	Right-handed alpha
Helix 21	AC3	A	868	893	Right-handed alpha
Helix 22	AC4	A	905	932	Right-handed alpha
Helix 23	AC5	L	80	84	Right-handed 310
Helix 24	AC6	H	28	32	Right-handed 310
Helix 25	AC7	H	87	91	Right-handed 310

There are 13 sheets in PDB entry 8SGT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	160	161	first strand
Strand 2	A	902	903	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	194	195	first strand
Strand 2	A	865	866	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	437	443	first strand
Strand 2	A	389	397	anti-parallel
Strand 3	A	372	376	anti-parallel
Strand 4	A	484	486	parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	382	384	first strand
Strand 2	A	491	497	parallel
Strand 3	A	454	465	anti-parallel
Strand 4	A	405	412	anti-parallel
Strand 5	A	428	431	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	568	573	first strand
Strand 2	A	521	527	anti-parallel
Strand 3	A	504	507	anti-parallel
Strand 4	A	670	671	parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	511	515	first strand
Strand 2	A	676	682	parallel
Strand 3	A	586	591	anti-parallel
Strand 4	A	535	543	anti-parallel
Strand 5	A	557	562	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	511	515	first strand
Strand 2	A	676	682	parallel
Strand 3	A	586	591	anti-parallel
Strand 4	A	535	543	anti-parallel
Strand 5	A	595	596	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	598	600	first strand
Strand 2	A	623	628	anti-parallel
Strand 3	A	613	620	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	3	4	first strand
Strand 2	L	17	23	anti-parallel
Strand 3	L	71	76	anti-parallel
Strand 4	L	63	68	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	10	11	first strand
Strand 2	L	103	107	parallel
Strand 3	L	85	91	anti-parallel
Strand 4	L	35	40	anti-parallel
Strand 5	L	44	49	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	10	11	first strand
Strand 2	L	103	107	parallel
Strand 3	L	85	91	anti-parallel
Strand 4	L	98	99	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	5	first strand
Strand 2	H	18	25	anti-parallel
Strand 3	H	78	83	anti-parallel
Strand 4	H	68	73	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	12	first strand
Strand 2	H	115	119	parallel
Strand 3	H	92	99	anti-parallel
Strand 4	H	33	39	anti-parallel
Strand 5	H	45	52	anti-parallel
Strand 6	H	57	60	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8SGT

Analysis of interatomic Contacts of Structural Units in PDB entry:
8SGT