Analysis of interatomic Contacts of Structural Units in PDB entry:
8SIN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8SIN entry

There are 8 chains in PDB entry 8SIN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 104GLY 568
B
 THR 6LYS 149
C
 THR 104GLY 568
D
 THR 6LYS 149
E
 THR 104GLY 568
F
 THR 6LYS 149
G
 THR 104GLY 568
H
 THR 6LYS 149
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are108 helices in PDB entry 8SIN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
104 115Right-handed alpha
Helix 2
AA2
A
120 143Right-handed alpha
Helix 3
AA3
A
148 156Right-handed alpha
Helix 4
AA4
A
156 178Right-handed alpha
Helix 5
AA5
A
179 184Right-handed 310
Helix 6
AA6
A
185 195Right-handed alpha
Helix 7
AA7
A
196 210Right-handed alpha
Helix 8
AA8
A
218 227Right-handed alpha
Helix 9
AA9
A
228 239Right-handed 310
Helix 10
AB1
A
252 258Right-handed alpha
Helix 11
AB2
A
258 284Right-handed alpha
Helix 12
AB3
A
289 293Right-handed 310
Helix 13
AB4
A
298 311Right-handed alpha
Helix 14
AB5
A
322 361Right-handed alpha
Helix 15
AB6
A
363 366Right-handed 310
Helix 16
AB7
A
367 385Right-handed alpha
Helix 17
AB8
A
389 394Right-handed 310
Helix 18
AB9
A
510 534Right-handed alpha
Helix 19
AC1
A
537 568Right-handed alpha
Helix 20
AC2
B
7 22Right-handed alpha
Helix 21
AC3
B
29 41Right-handed alpha
Helix 22
AC4
B
45 57Right-handed alpha
Helix 23
AC5
B
65 74Right-handed alpha
Helix 24
AC6
B
79 94Right-handed alpha
Helix 25
AC7
B
102 113Right-handed alpha
Helix 26
AC8
B
118 129Right-handed alpha
Helix 27
AC9
B
139 148Right-handed alpha
Helix 28
AD1
C
105 115Right-handed alpha
Helix 29
AD2
C
120 143Right-handed alpha
Helix 30
AD3
C
148 156Right-handed alpha
Helix 31
AD4
C
156 178Right-handed alpha
Helix 32
AD5
C
179 184Right-handed 310
Helix 33
AD6
C
185 195Right-handed alpha
Helix 34
AD7
C
196 210Right-handed alpha
Helix 35
AD8
C
218 227Right-handed alpha
Helix 36
AD9
C
228 239Right-handed 310
Helix 37
AE1
C
252 258Right-handed alpha
Helix 38
AE2
C
258 284Right-handed alpha
Helix 39
AE3
C
289 293Right-handed 310
Helix 40
AE4
C
298 311Right-handed alpha
Helix 41
AE5
C
322 361Right-handed alpha
Helix 42
AE6
C
363 366Right-handed 310
Helix 43
AE7
C
367 385Right-handed alpha
Helix 44
AE8
C
389 394Right-handed 310
Helix 45
AE9
C
510 534Right-handed alpha
Helix 46
AF1
C
537 568Right-handed alpha
Helix 47
AF2
D
7 22Right-handed alpha
Helix 48
AF3
D
29 41Right-handed alpha
Helix 49
AF4
D
45 57Right-handed alpha
Helix 50
AF5
D
65 74Right-handed alpha
Helix 51
AF6
D
79 94Right-handed alpha
Helix 52
AF7
D
102 113Right-handed alpha
Helix 53
AF8
D
118 129Right-handed alpha
Helix 54
AF9
D
139 148Right-handed alpha
Helix 55
AG1
E
105 115Right-handed alpha
Helix 56
AG2
E
120 143Right-handed alpha
Helix 57
AG3
E
148 156Right-handed alpha
Helix 58
AG4
E
156 178Right-handed alpha
Helix 59
AG5
E
179 184Right-handed 310
Helix 60
AG6
E
185 195Right-handed alpha
Helix 61
AG7
E
196 210Right-handed alpha
Helix 62
AG8
E
218 227Right-handed alpha
Helix 63
AG9
E
228 239Right-handed 310
Helix 64
AH1
E
252 258Right-handed alpha
Helix 65
AH2
E
258 284Right-handed alpha
Helix 66
AH3
E
289 293Right-handed 310
Helix 67
AH4
E
298 311Right-handed alpha
Helix 68
AH5
E
322 361Right-handed alpha
Helix 69
AH6
E
363 366Right-handed 310
Helix 70
AH7
E
367 385Right-handed alpha
Helix 71
AH8
E
389 394Right-handed 310
Helix 72
AH9
E
510 534Right-handed alpha
Helix 73
AI1
E
537 568Right-handed alpha
Helix 74
AI2
F
7 22Right-handed alpha
Helix 75
AI3
F
29 41Right-handed alpha
Helix 76
AI4
F
45 57Right-handed alpha
Helix 77
AI5
F
65 74Right-handed alpha
Helix 78
AI6
F
79 94Right-handed alpha
Helix 79
AI7
F
102 113Right-handed alpha
Helix 80
AI8
F
118 129Right-handed alpha
Helix 81
AI9
F
139 148Right-handed alpha
Helix 82
AJ1
G
105 115Right-handed alpha
Helix 83
AJ2
G
120 143Right-handed alpha
Helix 84
AJ3
G
148 156Right-handed alpha
Helix 85
AJ4
G
156 178Right-handed alpha
Helix 86
AJ5
G
179 184Right-handed 310
Helix 87
AJ6
G
185 195Right-handed alpha
Helix 88
AJ7
G
196 210Right-handed alpha
Helix 89
AJ8
G
218 227Right-handed alpha
Helix 90
AJ9
G
228 239Right-handed 310
Helix 91
AK1
G
252 258Right-handed alpha
Helix 92
AK2
G
258 284Right-handed alpha
Helix 93
AK3
G
289 293Right-handed 310
Helix 94
AK4
G
298 311Right-handed alpha
Helix 95
AK5
G
322 361Right-handed alpha
Helix 96
AK6
G
363 366Right-handed 310
Helix 97
AK7
G
367 385Right-handed alpha
Helix 98
AK8
G
389 394Right-handed 310
Helix 99
AK9
G
510 534Right-handed alpha
Helix 100
AL1
G
537 568Right-handed alpha
Helix 101
AL2
H
7 22Right-handed alpha
Helix 102
AL3
H
29 41Right-handed alpha
Helix 103
AL4
H
45 57Right-handed alpha
Helix 104
AL5
H
65 74Right-handed alpha
Helix 105
AL6
H
79 94Right-handed alpha
Helix 106
AL7
H
102 113Right-handed alpha
Helix 107
AL8
H
118 129Right-handed alpha
Helix 108
AL9
H
139 148Right-handed alpha
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There are 4 sheets in PDB entry 8SIN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
100 101first strand
Strand 2
B
137 138anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
100 101first strand
Strand 2
D
137 138anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
100 101first strand
Strand 2
F
137 138anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
100 101first strand
Strand 2
H
137 138anti-parallel
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