Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 8SJX entry
There is 1 chain in PDB entry 8SJX
(CSU analysis of residue contacts immediately below table)
Chain ID |
Initial residue | Terminal residue |
A
|
SER 6 | PRO 225 |
Back to top of page
There are 9
helices in PDB entry 8SJX. Click on helix of interest for
CSU analysis.
Helix number
| Helix ID | Chain ID |
Initial residue | Terminal residue |
Helix class |
Helix 1 |
AA1 | A
| 7 |
31 | Right-handed alpha |
Helix 2 |
AA2 | A
| 40 |
64 | Right-handed alpha |
Helix 3 |
AA3 | A
| 68 |
78 | Right-handed alpha |
Helix 4 |
AA4 | A
| 82 |
108 | Right-handed alpha |
Helix 5 |
AA5 | A
| 109 |
114 | Right-handed alpha |
Helix 6 |
AA6 | A
| 126 |
149 | Right-handed alpha |
Helix 7 |
AA7 | A
| 159 |
180 | Right-handed alpha |
Helix 8 |
AA8 | A
| 184 |
196 | Right-handed alpha |
Helix 9 |
AA9 | A
| 202 |
221 | Right-handed alpha |
Back to top of page
There are no sheets in PDB entry
8SJX
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il