Analysis of interatomic Contacts of Structural Units in PDB entry:
8SL4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8SL4 entry

There are 2 chains in PDB entry 8SL4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 205SER 1261
B
 LEU 205SER 1261
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 78 helices in PDB entry 8SL4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
206 216Right-handed alpha
Helix 2
AA2
A
223 262Right-handed alpha
Helix 3
AA3
A
267 290Right-handed alpha
Helix 4
AA4
A
295 319Right-handed alpha
Helix 5
AA5
A
328 342Right-handed alpha
Helix 6
AA6
A
346 369Right-handed alpha
Helix 7
AA7
A
374 433Right-handed alpha
Helix 8
AA8
A
438 451Right-handed alpha
Helix 9
AA9
A
477 485Right-handed alpha
Helix 10
AB1
A
486 508Right-handed alpha
Helix 11
AB2
A
532 556Right-handed alpha
Helix 12
AB3
A
586 598Right-handed alpha
Helix 13
AB4
A
608 614Right-handed alpha
Helix 14
AB5
A
624 629Right-handed alpha
Helix 15
AB6
A
629 635Right-handed alpha
Helix 16
AB7
A
712 727Right-handed alpha
Helix 17
AB8
A
728 736Right-handed alpha
Helix 18
AB9
A
746 756Right-handed alpha
Helix 19
AC1
A
760 783Right-handed alpha
Helix 20
AC2
A
786 812Right-handed alpha
Helix 21
AC3
A
813 816Right-handed 310
Helix 22
AC4
A
817 829Right-handed alpha
Helix 23
AC5
A
830 851Right-handed alpha
Helix 24
AC6
A
852 856Right-handed 310
Helix 25
AC7
A
860 870Right-handed alpha
Helix 26
AC8
A
872 876Right-handed 310
Helix 27
AC9
A
877 884Right-handed alpha
Helix 28
AD1
A
895 899Right-handed 310
Helix 29
AD2
A
907 924Right-handed alpha
Helix 30
AD3
A
928 949Right-handed alpha
Helix 31
AD4
A
951 967Right-handed alpha
Helix 32
AD5
A
985 1042Right-handed alpha
Helix 33
AD6
A
1079 1084Right-handed alpha
Helix 34
AD7
A
1087 1092Right-handed 310
Helix 35
AD8
A
1093 1111Right-handed alpha
Helix 36
AD9
A
1112 1117Right-handed 310
Helix 37
AE1
A
1145 1170Right-handed alpha
Helix 38
AE2
A
1200 1212Right-handed alpha
Helix 39
AE3
A
1222 1230Right-handed alpha
Helix 40
AE4
B
206 216Right-handed alpha
Helix 41
AE5
B
223 262Right-handed alpha
Helix 42
AE6
B
267 290Right-handed alpha
Helix 43
AE7
B
295 319Right-handed alpha
Helix 44
AE8
B
328 342Right-handed alpha
Helix 45
AE9
B
346 369Right-handed alpha
Helix 46
AF1
B
374 433Right-handed alpha
Helix 47
AF2
B
438 451Right-handed alpha
Helix 48
AF3
B
477 485Right-handed alpha
Helix 49
AF4
B
486 508Right-handed alpha
Helix 50
AF5
B
532 556Right-handed alpha
Helix 51
AF6
B
586 598Right-handed alpha
Helix 52
AF7
B
608 614Right-handed alpha
Helix 53
AF8
B
624 629Right-handed alpha
Helix 54
AF9
B
629 635Right-handed alpha
Helix 55
AG1
B
712 727Right-handed alpha
Helix 56
AG2
B
728 737Right-handed alpha
Helix 57
AG3
B
746 755Right-handed alpha
Helix 58
AG4
B
760 783Right-handed alpha
Helix 59
AG5
B
786 812Right-handed alpha
Helix 60
AG6
B
813 816Right-handed 310
Helix 61
AG7
B
817 829Right-handed alpha
Helix 62
AG8
B
830 851Right-handed alpha
Helix 63
AG9
B
852 856Right-handed 310
Helix 64
AH1
B
860 870Right-handed alpha
Helix 65
AH2
B
872 876Right-handed 310
Helix 66
AH3
B
877 884Right-handed alpha
Helix 67
AH4
B
895 899Right-handed 310
Helix 68
AH5
B
907 924Right-handed alpha
Helix 69
AH6
B
928 949Right-handed alpha
Helix 70
AH7
B
951 967Right-handed alpha
Helix 71
AH8
B
985 1042Right-handed alpha
Helix 72
AH9
B
1079 1084Right-handed alpha
Helix 73
AI1
B
1087 1092Right-handed 310
Helix 74
AI2
B
1093 1111Right-handed alpha
Helix 75
AI3
B
1112 1117Right-handed 310
Helix 76
AI4
B
1145 1170Right-handed alpha
Helix 77
AI5
B
1200 1212Right-handed alpha
Helix 78
AI6
B
1222 1230Right-handed alpha
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There are 8 sheets in PDB entry 8SL4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
511 516first strand
Strand 2
A
519 524anti-parallel
Strand 3
A
461 476anti-parallel
Strand 4
A
560 574anti-parallel
Strand 5
A
583 585anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
511 516first strand
Strand 2
A
519 524anti-parallel
Strand 3
A
461 476anti-parallel
Strand 4
A
560 574anti-parallel
Strand 5
A
604 607parallel
Strand 6
A
639 644anti-parallel
Strand 7
A
619 622anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1119 1125first strand
Strand 2
A
1128 1133anti-parallel
Strand 3
A
1064 1077anti-parallel
Strand 4
A
1175 1189anti-parallel
Strand 5
A
1195 1199anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1119 1125first strand
Strand 2
A
1128 1133anti-parallel
Strand 3
A
1064 1077anti-parallel
Strand 4
A
1175 1189anti-parallel
Strand 5
A
1217 1221parallel
Strand 6
A
1247 1256anti-parallel
Strand 7
A
1234 1243anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
511 516first strand
Strand 2
B
519 524anti-parallel
Strand 3
B
461 476anti-parallel
Strand 4
B
560 574anti-parallel
Strand 5
B
583 585anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
511 516first strand
Strand 2
B
519 524anti-parallel
Strand 3
B
461 476anti-parallel
Strand 4
B
560 574anti-parallel
Strand 5
B
604 607parallel
Strand 6
B
639 644anti-parallel
Strand 7
B
619 622anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1119 1125first strand
Strand 2
B
1128 1133anti-parallel
Strand 3
B
1064 1077anti-parallel
Strand 4
B
1175 1189anti-parallel
Strand 5
B
1195 1199anti-parallel
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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1119 1125first strand
Strand 2
B
1128 1133anti-parallel
Strand 3
B
1064 1077anti-parallel
Strand 4
B
1175 1189anti-parallel
Strand 5
B
1217 1221parallel
Strand 6
B
1247 1256anti-parallel
Strand 7
B
1234 1243anti-parallel
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