Analysis of interatomic Contacts of Structural Units in PDB entry:
8SL6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8SL6 entry

There are 4 chains in PDB entry 8SL6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	CYS 24	GLY 1092
B	CYS 24	SER 1106
C	CYS 24	MET 1118
D	CYS 24	TYR 1110

There are176 helices in PDB entry 8SL6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	48	61	Right-handed alpha
Helix 2	AA2	A	81	97	Right-handed alpha
Helix 3	AA3	A	111	126	Right-handed alpha
Helix 4	AA4	A	147	152	Right-handed alpha
Helix 5	AA5	A	197	212	Right-handed alpha
Helix 6	AA6	A	236	248	Right-handed alpha
Helix 7	AA7	A	260	270	Right-handed alpha
Helix 8	AA8	A	277	288	Right-handed alpha
Helix 9	AA9	A	295	311	Right-handed alpha
Helix 10	AB1	A	330	345	Right-handed alpha
Helix 11	AB2	A	347	362	Right-handed alpha
Helix 12	AB3	A	363	372	Right-handed alpha
Helix 13	AB4	A	379	394	Right-handed alpha
Helix 14	AB5	A	395	405	Right-handed alpha
Helix 15	AB6	A	408	413	Right-handed alpha
Helix 16	AB7	A	414	424	Right-handed alpha
Helix 17	AB8	A	429	446	Right-handed alpha
Helix 18	AB9	A	465	478	Right-handed alpha
Helix 19	AC1	A	515	527	Right-handed alpha
Helix 20	AC2	A	529	539	Right-handed alpha
Helix 21	AC3	A	544	560	Right-handed alpha
Helix 22	AC4	A	563	572	Right-handed alpha
Helix 23	AC5	A	574	590	Right-handed alpha
Helix 24	AC6	A	592	599	Right-handed alpha
Helix 25	AC7	A	602	606	Right-handed 310
Helix 26	AC8	A	609	618	Right-handed alpha
Helix 27	AC9	A	619	624	Right-handed alpha
Helix 28	AD1	A	625	638	Right-handed alpha
Helix 29	AD2	A	645	655	Right-handed alpha
Helix 30	AD3	A	657	662	Right-handed alpha
Helix 31	AD4	A	719	729	Right-handed alpha
Helix 32	AD5	A	729	756	Right-handed alpha
Helix 33	AD6	A	763	787	Right-handed alpha
Helix 34	AD7	A	793	804	Right-handed alpha
Helix 35	AD8	A	804	825	Right-handed alpha
Helix 36	AD9	A	829	851	Right-handed alpha
Helix 37	AE1	A	857	895	Right-handed alpha
Helix 38	AE2	A	900	917	Right-handed alpha
Helix 39	AE3	A	921	926	Right-handed alpha
Helix 40	AE4	A	959	984	Right-handed alpha
Helix 41	AE5	A	984	1006	Right-handed alpha
Helix 42	AE6	A	1010	1027	Right-handed alpha
Helix 43	AE7	A	1044	1071	Right-handed alpha
Helix 44	AE8	A	1072	1092	Right-handed alpha
Helix 45	AE9	B	48	61	Right-handed alpha
Helix 46	AF1	B	81	99	Right-handed alpha
Helix 47	AF2	B	111	125	Right-handed alpha
Helix 48	AF3	B	147	153	Right-handed alpha
Helix 49	AF4	B	197	212	Right-handed alpha
Helix 50	AF5	B	236	248	Right-handed alpha
Helix 51	AF6	B	260	270	Right-handed alpha
Helix 52	AF7	B	277	288	Right-handed alpha
Helix 53	AF8	B	295	311	Right-handed alpha
Helix 54	AF9	B	330	345	Right-handed alpha
Helix 55	AG1	B	347	362	Right-handed alpha
Helix 56	AG2	B	363	375	Right-handed alpha
Helix 57	AG3	B	379	393	Right-handed alpha
Helix 58	AG4	B	395	404	Right-handed alpha
Helix 59	AG5	B	408	413	Right-handed alpha
Helix 60	AG6	B	414	423	Right-handed alpha
Helix 61	AG7	B	429	446	Right-handed alpha
Helix 62	AG8	B	465	477	Right-handed alpha
Helix 63	AG9	B	515	527	Right-handed alpha
Helix 64	AH1	B	529	539	Right-handed alpha
Helix 65	AH2	B	542	561	Right-handed alpha
Helix 66	AH3	B	563	572	Right-handed alpha
Helix 67	AH4	B	574	591	Right-handed alpha
Helix 68	AH5	B	592	599	Right-handed alpha
Helix 69	AH6	B	602	606	Right-handed 310
Helix 70	AH7	B	609	618	Right-handed alpha
Helix 71	AH8	B	619	624	Right-handed alpha
Helix 72	AH9	B	625	638	Right-handed alpha
Helix 73	AI1	B	645	655	Right-handed alpha
Helix 74	AI2	B	656	661	Right-handed alpha
Helix 75	AI3	B	719	729	Right-handed alpha
Helix 76	AI4	B	729	756	Right-handed alpha
Helix 77	AI5	B	763	787	Right-handed alpha
Helix 78	AI6	B	793	803	Right-handed alpha
Helix 79	AI7	B	804	824	Right-handed alpha
Helix 80	AI8	B	829	849	Right-handed alpha
Helix 81	AI9	B	850	855	Right-handed 310
Helix 82	AJ1	B	858	895	Right-handed alpha
Helix 83	AJ2	B	900	917	Right-handed alpha
Helix 84	AJ3	B	921	926	Right-handed alpha
Helix 85	AJ4	B	959	984	Right-handed alpha
Helix 86	AJ5	B	984	1006	Right-handed alpha
Helix 87	AJ6	B	1013	1027	Right-handed alpha
Helix 88	AJ7	B	1044	1071	Right-handed alpha
Helix 89	AJ8	B	1072	1090	Right-handed alpha
Helix 90	AJ9	B	1090	1095	Right-handed alpha
Helix 91	AK1	B	1097	1106	Right-handed alpha
Helix 92	AK2	C	48	61	Right-handed alpha
Helix 93	AK3	C	81	97	Right-handed alpha
Helix 94	AK4	C	111	126	Right-handed alpha
Helix 95	AK5	C	147	153	Right-handed alpha
Helix 96	AK6	C	197	212	Right-handed alpha
Helix 97	AK7	C	236	249	Right-handed alpha
Helix 98	AK8	C	260	270	Right-handed alpha
Helix 99	AK9	C	277	288	Right-handed alpha
Helix 100	AL1	C	295	311	Right-handed alpha
Helix 101	AL2	C	330	345	Right-handed alpha
Helix 102	AL3	C	347	360	Right-handed alpha
Helix 103	AL4	C	363	373	Right-handed alpha
Helix 104	AL5	C	379	392	Right-handed alpha
Helix 105	AL6	C	395	406	Right-handed alpha
Helix 106	AL7	C	408	413	Right-handed alpha
Helix 107	AL8	C	414	423	Right-handed alpha
Helix 108	AL9	C	429	446	Right-handed alpha
Helix 109	AM1	C	465	478	Right-handed alpha
Helix 110	AM2	C	515	527	Right-handed alpha
Helix 111	AM3	C	529	540	Right-handed alpha
Helix 112	AM4	C	543	559	Right-handed alpha
Helix 113	AM5	C	563	572	Right-handed alpha
Helix 114	AM6	C	574	591	Right-handed alpha
Helix 115	AM7	C	592	600	Right-handed alpha
Helix 116	AM8	C	602	606	Right-handed 310
Helix 117	AM9	C	609	618	Right-handed alpha
Helix 118	AN1	C	619	624	Right-handed alpha
Helix 119	AN2	C	625	638	Right-handed alpha
Helix 120	AN3	C	645	653	Right-handed alpha
Helix 121	AN4	C	656	662	Right-handed alpha
Helix 122	AN5	C	719	729	Right-handed alpha
Helix 123	AN6	C	729	756	Right-handed alpha
Helix 124	AN7	C	767	787	Right-handed alpha
Helix 125	AN8	C	793	803	Right-handed alpha
Helix 126	AN9	C	804	826	Right-handed alpha
Helix 127	AO1	C	829	853	Right-handed alpha
Helix 128	AO2	C	857	895	Right-handed alpha
Helix 129	AO3	C	900	917	Right-handed alpha
Helix 130	AO4	C	959	985	Right-handed alpha
Helix 131	AO5	C	987	1006	Right-handed alpha
Helix 132	AO6	C	1010	1027	Right-handed alpha
Helix 133	AO7	C	1044	1071	Right-handed alpha
Helix 134	AO8	C	1072	1115	Right-handed alpha
Helix 135	AO9	D	48	61	Right-handed alpha
Helix 136	AP1	D	81	99	Right-handed alpha
Helix 137	AP2	D	111	126	Right-handed alpha
Helix 138	AP3	D	147	153	Right-handed alpha
Helix 139	AP4	D	197	212	Right-handed alpha
Helix 140	AP5	D	236	249	Right-handed alpha
Helix 141	AP6	D	260	272	Right-handed alpha
Helix 142	AP7	D	277	288	Right-handed alpha
Helix 143	AP8	D	295	310	Right-handed alpha
Helix 144	AP9	D	330	345	Right-handed alpha
Helix 145	AQ1	D	347	362	Right-handed alpha
Helix 146	AQ2	D	363	373	Right-handed alpha
Helix 147	AQ3	D	379	392	Right-handed alpha
Helix 148	AQ4	D	395	404	Right-handed alpha
Helix 149	AQ5	D	408	413	Right-handed alpha
Helix 150	AQ6	D	414	423	Right-handed alpha
Helix 151	AQ7	D	429	446	Right-handed alpha
Helix 152	AQ8	D	465	477	Right-handed alpha
Helix 153	AQ9	D	515	527	Right-handed alpha
Helix 154	AR1	D	529	539	Right-handed alpha
Helix 155	AR2	D	542	561	Right-handed alpha
Helix 156	AR3	D	563	572	Right-handed alpha
Helix 157	AR4	D	574	591	Right-handed alpha
Helix 158	AR5	D	593	598	Right-handed alpha
Helix 159	AR6	D	610	618	Right-handed alpha
Helix 160	AR7	D	619	625	Right-handed alpha
Helix 161	AR8	D	625	638	Right-handed alpha
Helix 162	AR9	D	645	652	Right-handed alpha
Helix 163	AS1	D	656	664	Right-handed alpha
Helix 164	AS2	D	719	729	Right-handed alpha
Helix 165	AS3	D	729	757	Right-handed alpha
Helix 166	AS4	D	765	787	Right-handed alpha
Helix 167	AS5	D	793	803	Right-handed alpha
Helix 168	AS6	D	804	826	Right-handed alpha
Helix 169	AS7	D	830	851	Right-handed alpha
Helix 170	AS8	D	860	895	Right-handed alpha
Helix 171	AS9	D	900	916	Right-handed alpha
Helix 172	AT1	D	921	926	Right-handed alpha
Helix 173	AT2	D	959	1006	Right-handed alpha
Helix 174	AT3	D	1010	1027	Right-handed alpha
Helix 175	AT4	D	1044	1071	Right-handed alpha
Helix 176	AT5	D	1072	1108	Right-handed alpha

There are 9 sheets in PDB entry 8SL6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	25	28	first strand
Strand 2	A	38	41	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	184	188	first strand
Strand 2	A	137	141	parallel
Strand 3	A	102	106	parallel
Strand 4	A	68	71	parallel
Strand 5	A	228	232	parallel
Strand 6	A	253	256	parallel
Strand 7	A	316	319	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	25	28	first strand
Strand 2	B	38	41	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	184	188	first strand
Strand 2	B	135	141	parallel
Strand 3	B	102	105	parallel
Strand 4	B	68	71	parallel
Strand 5	B	228	232	parallel
Strand 6	B	253	256	parallel
Strand 7	B	316	319	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	25	28	first strand
Strand 2	C	38	41	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	184	188	first strand
Strand 2	C	135	141	parallel
Strand 3	C	101	106	parallel
Strand 4	C	67	71	parallel
Strand 5	C	228	232	parallel
Strand 6	C	253	256	parallel
Strand 7	C	316	319	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	25	28	first strand
Strand 2	D	38	41	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	184	188	first strand
Strand 2	D	135	141	parallel
Strand 3	D	102	103	parallel
Strand 4	D	68	71	parallel
Strand 5	D	228	232	parallel
Strand 6	D	253	256	parallel
Strand 7	D	316	319	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	601	602	first strand
Strand 2	D	608	609	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8SL6

Analysis of interatomic Contacts of Structural Units in PDB entry:
8SL6