Analysis of interatomic Contacts of Structural Units in PDB entry:
8SL8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8SL8 entry

There are 4 chains in PDB entry 8SL8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 VAL 47GLY 1092
A
 VAL 47GLY 1092
C
 VAL 47GLY 1092
D
 VAL 47GLY 1092
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are168 helices in PDB entry 8SL8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
48 58Right-handed alpha
Helix 2
AA2
B
81 97Right-handed alpha
Helix 3
AA3
B
115 123Right-handed alpha
Helix 4
AA4
B
201 214Right-handed alpha
Helix 5
AA5
B
239 249Right-handed alpha
Helix 6
AA6
B
262 272Right-handed alpha
Helix 7
AA7
B
280 289Right-handed alpha
Helix 8
AA8
B
296 310Right-handed alpha
Helix 9
AA9
B
329 345Right-handed alpha
Helix 10
AB1
B
347 362Right-handed alpha
Helix 11
AB2
B
363 371Right-handed alpha
Helix 12
AB3
B
379 393Right-handed alpha
Helix 13
AB4
B
395 405Right-handed alpha
Helix 14
AB5
B
408 413Right-handed alpha
Helix 15
AB6
B
414 424Right-handed alpha
Helix 16
AB7
B
429 446Right-handed alpha
Helix 17
AB8
B
465 478Right-handed alpha
Helix 18
AB9
B
515 527Right-handed alpha
Helix 19
AC1
B
529 539Right-handed alpha
Helix 20
AC2
B
542 561Right-handed alpha
Helix 21
AC3
B
563 571Right-handed alpha
Helix 22
AC4
B
574 590Right-handed alpha
Helix 23
AC5
B
592 599Right-handed alpha
Helix 24
AC6
B
602 606Right-handed 310
Helix 25
AC7
B
609 618Right-handed alpha
Helix 26
AC8
B
619 624Right-handed alpha
Helix 27
AC9
B
625 637Right-handed alpha
Helix 28
AD1
B
645 655Right-handed alpha
Helix 29
AD2
B
657 662Right-handed alpha
Helix 30
AD3
B
719 727Right-handed alpha
Helix 31
AD4
B
729 757Right-handed alpha
Helix 32
AD5
B
763 786Right-handed alpha
Helix 33
AD6
B
807 826Right-handed alpha
Helix 34
AD7
B
829 851Right-handed alpha
Helix 35
AD8
B
857 868Right-handed alpha
Helix 36
AD9
B
871 895Right-handed alpha
Helix 37
AE1
B
900 917Right-handed alpha
Helix 38
AE2
B
921 926Right-handed alpha
Helix 39
AE3
B
959 1006Right-handed alpha
Helix 40
AE4
B
1010 1027Right-handed alpha
Helix 41
AE5
B
1044 1071Right-handed alpha
Helix 42
AE6
B
1072 1092Right-handed alpha
Helix 43
AE7
A
48 58Right-handed alpha
Helix 44
AE8
A
81 97Right-handed alpha
Helix 45
AE9
A
115 123Right-handed alpha
Helix 46
AF1
A
201 214Right-handed alpha
Helix 47
AF2
A
239 249Right-handed alpha
Helix 48
AF3
A
262 272Right-handed alpha
Helix 49
AF4
A
280 289Right-handed alpha
Helix 50
AF5
A
296 310Right-handed alpha
Helix 51
AF6
A
329 345Right-handed alpha
Helix 52
AF7
A
347 362Right-handed alpha
Helix 53
AF8
A
363 371Right-handed alpha
Helix 54
AF9
A
379 393Right-handed alpha
Helix 55
AG1
A
395 405Right-handed alpha
Helix 56
AG2
A
408 413Right-handed alpha
Helix 57
AG3
A
414 424Right-handed alpha
Helix 58
AG4
A
429 446Right-handed alpha
Helix 59
AG5
A
465 478Right-handed alpha
Helix 60
AG6
A
515 527Right-handed alpha
Helix 61
AG7
A
529 539Right-handed alpha
Helix 62
AG8
A
542 561Right-handed alpha
Helix 63
AG9
A
563 571Right-handed alpha
Helix 64
AH1
A
574 590Right-handed alpha
Helix 65
AH2
A
592 599Right-handed alpha
Helix 66
AH3
A
602 606Right-handed 310
Helix 67
AH4
A
609 618Right-handed alpha
Helix 68
AH5
A
619 624Right-handed alpha
Helix 69
AH6
A
625 637Right-handed alpha
Helix 70
AH7
A
645 655Right-handed alpha
Helix 71
AH8
A
657 662Right-handed alpha
Helix 72
AH9
A
719 727Right-handed alpha
Helix 73
AI1
A
729 757Right-handed alpha
Helix 74
AI2
A
763 786Right-handed alpha
Helix 75
AI3
A
807 826Right-handed alpha
Helix 76
AI4
A
829 851Right-handed alpha
Helix 77
AI5
A
857 868Right-handed alpha
Helix 78
AI6
A
871 895Right-handed alpha
Helix 79
AI7
A
900 917Right-handed alpha
Helix 80
AI8
A
921 926Right-handed alpha
Helix 81
AI9
A
959 1006Right-handed alpha
Helix 82
AJ1
A
1010 1027Right-handed alpha
Helix 83
AJ2
A
1044 1071Right-handed alpha
Helix 84
AJ3
A
1072 1092Right-handed alpha
Helix 85
AJ4
C
48 58Right-handed alpha
Helix 86
AJ5
C
81 97Right-handed alpha
Helix 87
AJ6
C
115 123Right-handed alpha
Helix 88
AJ7
C
201 214Right-handed alpha
Helix 89
AJ8
C
239 249Right-handed alpha
Helix 90
AJ9
C
262 272Right-handed alpha
Helix 91
AK1
C
280 289Right-handed alpha
Helix 92
AK2
C
296 310Right-handed alpha
Helix 93
AK3
C
329 345Right-handed alpha
Helix 94
AK4
C
347 362Right-handed alpha
Helix 95
AK5
C
363 371Right-handed alpha
Helix 96
AK6
C
379 393Right-handed alpha
Helix 97
AK7
C
395 405Right-handed alpha
Helix 98
AK8
C
408 413Right-handed alpha
Helix 99
AK9
C
414 424Right-handed alpha
Helix 100
AL1
C
429 446Right-handed alpha
Helix 101
AL2
C
465 478Right-handed alpha
Helix 102
AL3
C
515 527Right-handed alpha
Helix 103
AL4
C
529 539Right-handed alpha
Helix 104
AL5
C
542 561Right-handed alpha
Helix 105
AL6
C
563 571Right-handed alpha
Helix 106
AL7
C
574 590Right-handed alpha
Helix 107
AL8
C
592 599Right-handed alpha
Helix 108
AL9
C
602 606Right-handed 310
Helix 109
AM1
C
609 618Right-handed alpha
Helix 110
AM2
C
619 624Right-handed alpha
Helix 111
AM3
C
625 637Right-handed alpha
Helix 112
AM4
C
645 655Right-handed alpha
Helix 113
AM5
C
657 662Right-handed alpha
Helix 114
AM6
C
719 727Right-handed alpha
Helix 115
AM7
C
729 757Right-handed alpha
Helix 116
AM8
C
763 786Right-handed alpha
Helix 117
AM9
C
807 826Right-handed alpha
Helix 118
AN1
C
829 851Right-handed alpha
Helix 119
AN2
C
857 868Right-handed alpha
Helix 120
AN3
C
871 895Right-handed alpha
Helix 121
AN4
C
900 917Right-handed alpha
Helix 122
AN5
C
921 926Right-handed alpha
Helix 123
AN6
C
959 1006Right-handed alpha
Helix 124
AN7
C
1010 1027Right-handed alpha
Helix 125
AN8
C
1044 1071Right-handed alpha
Helix 126
AN9
C
1072 1092Right-handed alpha
Helix 127
AO1
D
48 58Right-handed alpha
Helix 128
AO2
D
81 97Right-handed alpha
Helix 129
AO3
D
115 123Right-handed alpha
Helix 130
AO4
D
201 214Right-handed alpha
Helix 131
AO5
D
239 249Right-handed alpha
Helix 132
AO6
D
262 272Right-handed alpha
Helix 133
AO7
D
280 289Right-handed alpha
Helix 134
AO8
D
296 310Right-handed alpha
Helix 135
AO9
D
329 345Right-handed alpha
Helix 136
AP1
D
347 362Right-handed alpha
Helix 137
AP2
D
363 371Right-handed alpha
Helix 138
AP3
D
379 393Right-handed alpha
Helix 139
AP4
D
395 405Right-handed alpha
Helix 140
AP5
D
408 413Right-handed alpha
Helix 141
AP6
D
414 424Right-handed alpha
Helix 142
AP7
D
429 446Right-handed alpha
Helix 143
AP8
D
465 478Right-handed alpha
Helix 144
AP9
D
515 527Right-handed alpha
Helix 145
AQ1
D
529 539Right-handed alpha
Helix 146
AQ2
D
542 561Right-handed alpha
Helix 147
AQ3
D
563 571Right-handed alpha
Helix 148
AQ4
D
574 590Right-handed alpha
Helix 149
AQ5
D
592 599Right-handed alpha
Helix 150
AQ6
D
602 606Right-handed 310
Helix 151
AQ7
D
609 618Right-handed alpha
Helix 152
AQ8
D
619 624Right-handed alpha
Helix 153
AQ9
D
625 637Right-handed alpha
Helix 154
AR1
D
645 655Right-handed alpha
Helix 155
AR2
D
657 662Right-handed alpha
Helix 156
AR3
D
719 727Right-handed alpha
Helix 157
AR4
D
729 757Right-handed alpha
Helix 158
AR5
D
763 786Right-handed alpha
Helix 159
AR6
D
807 826Right-handed alpha
Helix 160
AR7
D
829 851Right-handed alpha
Helix 161
AR8
D
857 868Right-handed alpha
Helix 162
AR9
D
871 895Right-handed alpha
Helix 163
AS1
D
900 917Right-handed alpha
Helix 164
AS2
D
921 926Right-handed alpha
Helix 165
AS3
D
959 1006Right-handed alpha
Helix 166
AS4
D
1010 1027Right-handed alpha
Helix 167
AS5
D
1044 1071Right-handed alpha
Helix 168
AS6
D
1072 1092Right-handed alpha
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There are 4 sheets in PDB entry 8SL8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
103 104first strand
Strand 2
B
69 71parallel
Strand 3
B
229 232parallel
Strand 4
B
253 255parallel
Strand 5
B
316 318parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 104first strand
Strand 2
A
69 71parallel
Strand 3
A
229 232parallel
Strand 4
A
253 255parallel
Strand 5
A
316 318parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
103 104first strand
Strand 2
C
69 71parallel
Strand 3
C
229 232parallel
Strand 4
C
253 255parallel
Strand 5
C
316 318parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
103 104first strand
Strand 2
D
69 71parallel
Strand 3
D
229 232parallel
Strand 4
D
253 255parallel
Strand 5
D
316 318parallel
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