Analysis of interatomic Contacts of Structural Units in PDB entry:
8SLA

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8SLA entry

There are 4 chains in PDB entry 8SLA (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
D	CYS 24	LEU 1094
C	CYS 24	LEU 1094
A	CYS 24	LEU 1094
B	CYS 24	LEU 1094

There are180 helices in PDB entry 8SLA. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	D	48	60	Right-handed alpha
Helix 2	AA2	D	81	99	Right-handed alpha
Helix 3	AA3	D	111	125	Right-handed alpha
Helix 4	AA4	D	147	152	Right-handed alpha
Helix 5	AA5	D	197	211	Right-handed alpha
Helix 6	AA6	D	238	248	Right-handed alpha
Helix 7	AA7	D	260	270	Right-handed alpha
Helix 8	AA8	D	277	288	Right-handed alpha
Helix 9	AA9	D	295	310	Right-handed alpha
Helix 10	AB1	D	311	314	Right-handed 310
Helix 11	AB2	D	330	345	Right-handed alpha
Helix 12	AB3	D	348	362	Right-handed alpha
Helix 13	AB4	D	363	371	Right-handed alpha
Helix 14	AB5	D	380	392	Right-handed alpha
Helix 15	AB6	D	395	404	Right-handed alpha
Helix 16	AB7	D	414	424	Right-handed alpha
Helix 17	AB8	D	429	446	Right-handed alpha
Helix 18	AB9	D	465	477	Right-handed alpha
Helix 19	AC1	D	515	527	Right-handed alpha
Helix 20	AC2	D	530	538	Right-handed alpha
Helix 21	AC3	D	545	559	Right-handed alpha
Helix 22	AC4	D	563	572	Right-handed alpha
Helix 23	AC5	D	576	589	Right-handed alpha
Helix 24	AC6	D	593	599	Right-handed alpha
Helix 25	AC7	D	609	617	Right-handed alpha
Helix 26	AC8	D	619	624	Right-handed alpha
Helix 27	AC9	D	625	638	Right-handed alpha
Helix 28	AD1	D	645	652	Right-handed alpha
Helix 29	AD2	D	656	664	Right-handed alpha
Helix 30	AD3	D	719	727	Right-handed alpha
Helix 31	AD4	D	729	754	Right-handed alpha
Helix 32	AD5	D	764	787	Right-handed alpha
Helix 33	AD6	D	793	803	Right-handed alpha
Helix 34	AD7	D	805	824	Right-handed alpha
Helix 35	AD8	D	825	828	Right-handed 310
Helix 36	AD9	D	829	848	Right-handed alpha
Helix 37	AE1	D	849	853	Right-handed 310
Helix 38	AE2	D	858	895	Right-handed alpha
Helix 39	AE3	D	900	915	Right-handed alpha
Helix 40	AE4	D	921	926	Right-handed alpha
Helix 41	AE5	D	950	985	Right-handed alpha
Helix 42	AE6	D	987	1006	Right-handed alpha
Helix 43	AE7	D	1013	1027	Right-handed alpha
Helix 44	AE8	D	1044	1071	Right-handed alpha
Helix 45	AE9	D	1072	1094	Right-handed alpha
Helix 46	AF1	C	48	60	Right-handed alpha
Helix 47	AF2	C	81	99	Right-handed alpha
Helix 48	AF3	C	111	125	Right-handed alpha
Helix 49	AF4	C	147	152	Right-handed alpha
Helix 50	AF5	C	197	211	Right-handed alpha
Helix 51	AF6	C	238	248	Right-handed alpha
Helix 52	AF7	C	260	270	Right-handed alpha
Helix 53	AF8	C	277	288	Right-handed alpha
Helix 54	AF9	C	295	310	Right-handed alpha
Helix 55	AG1	C	311	314	Right-handed 310
Helix 56	AG2	C	330	345	Right-handed alpha
Helix 57	AG3	C	348	362	Right-handed alpha
Helix 58	AG4	C	363	371	Right-handed alpha
Helix 59	AG5	C	380	392	Right-handed alpha
Helix 60	AG6	C	395	404	Right-handed alpha
Helix 61	AG7	C	414	424	Right-handed alpha
Helix 62	AG8	C	429	446	Right-handed alpha
Helix 63	AG9	C	465	477	Right-handed alpha
Helix 64	AH1	C	515	527	Right-handed alpha
Helix 65	AH2	C	530	538	Right-handed alpha
Helix 66	AH3	C	545	559	Right-handed alpha
Helix 67	AH4	C	563	572	Right-handed alpha
Helix 68	AH5	C	576	589	Right-handed alpha
Helix 69	AH6	C	593	599	Right-handed alpha
Helix 70	AH7	C	609	617	Right-handed alpha
Helix 71	AH8	C	619	624	Right-handed alpha
Helix 72	AH9	C	625	638	Right-handed alpha
Helix 73	AI1	C	645	652	Right-handed alpha
Helix 74	AI2	C	656	664	Right-handed alpha
Helix 75	AI3	C	719	727	Right-handed alpha
Helix 76	AI4	C	729	754	Right-handed alpha
Helix 77	AI5	C	764	787	Right-handed alpha
Helix 78	AI6	C	793	803	Right-handed alpha
Helix 79	AI7	C	805	824	Right-handed alpha
Helix 80	AI8	C	825	828	Right-handed 310
Helix 81	AI9	C	829	848	Right-handed alpha
Helix 82	AJ1	C	849	853	Right-handed 310
Helix 83	AJ2	C	858	895	Right-handed alpha
Helix 84	AJ3	C	900	915	Right-handed alpha
Helix 85	AJ4	C	921	926	Right-handed alpha
Helix 86	AJ5	C	950	985	Right-handed alpha
Helix 87	AJ6	C	987	1006	Right-handed alpha
Helix 88	AJ7	C	1013	1027	Right-handed alpha
Helix 89	AJ8	C	1044	1071	Right-handed alpha
Helix 90	AJ9	C	1072	1094	Right-handed alpha
Helix 91	AK1	A	48	60	Right-handed alpha
Helix 92	AK2	A	81	99	Right-handed alpha
Helix 93	AK3	A	111	125	Right-handed alpha
Helix 94	AK4	A	147	152	Right-handed alpha
Helix 95	AK5	A	197	211	Right-handed alpha
Helix 96	AK6	A	238	248	Right-handed alpha
Helix 97	AK7	A	260	270	Right-handed alpha
Helix 98	AK8	A	277	288	Right-handed alpha
Helix 99	AK9	A	295	310	Right-handed alpha
Helix 100	AL1	A	311	314	Right-handed 310
Helix 101	AL2	A	330	345	Right-handed alpha
Helix 102	AL3	A	348	362	Right-handed alpha
Helix 103	AL4	A	363	371	Right-handed alpha
Helix 104	AL5	A	380	392	Right-handed alpha
Helix 105	AL6	A	395	404	Right-handed alpha
Helix 106	AL7	A	414	424	Right-handed alpha
Helix 107	AL8	A	429	446	Right-handed alpha
Helix 108	AL9	A	465	477	Right-handed alpha
Helix 109	AM1	A	515	527	Right-handed alpha
Helix 110	AM2	A	530	538	Right-handed alpha
Helix 111	AM3	A	545	559	Right-handed alpha
Helix 112	AM4	A	563	572	Right-handed alpha
Helix 113	AM5	A	576	589	Right-handed alpha
Helix 114	AM6	A	593	599	Right-handed alpha
Helix 115	AM7	A	609	617	Right-handed alpha
Helix 116	AM8	A	619	624	Right-handed alpha
Helix 117	AM9	A	625	638	Right-handed alpha
Helix 118	AN1	A	645	652	Right-handed alpha
Helix 119	AN2	A	656	664	Right-handed alpha
Helix 120	AN3	A	719	727	Right-handed alpha
Helix 121	AN4	A	729	754	Right-handed alpha
Helix 122	AN5	A	764	787	Right-handed alpha
Helix 123	AN6	A	793	803	Right-handed alpha
Helix 124	AN7	A	805	824	Right-handed alpha
Helix 125	AN8	A	825	828	Right-handed 310
Helix 126	AN9	A	829	848	Right-handed alpha
Helix 127	AO1	A	849	853	Right-handed 310
Helix 128	AO2	A	858	895	Right-handed alpha
Helix 129	AO3	A	900	915	Right-handed alpha
Helix 130	AO4	A	921	926	Right-handed alpha
Helix 131	AO5	A	950	985	Right-handed alpha
Helix 132	AO6	A	987	1006	Right-handed alpha
Helix 133	AO7	A	1013	1027	Right-handed alpha
Helix 134	AO8	A	1044	1071	Right-handed alpha
Helix 135	AO9	A	1072	1094	Right-handed alpha
Helix 136	AP1	B	48	60	Right-handed alpha
Helix 137	AP2	B	81	99	Right-handed alpha
Helix 138	AP3	B	111	125	Right-handed alpha
Helix 139	AP4	B	147	152	Right-handed alpha
Helix 140	AP5	B	197	211	Right-handed alpha
Helix 141	AP6	B	238	248	Right-handed alpha
Helix 142	AP7	B	260	270	Right-handed alpha
Helix 143	AP8	B	277	288	Right-handed alpha
Helix 144	AP9	B	295	310	Right-handed alpha
Helix 145	AQ1	B	311	314	Right-handed 310
Helix 146	AQ2	B	330	345	Right-handed alpha
Helix 147	AQ3	B	348	362	Right-handed alpha
Helix 148	AQ4	B	363	371	Right-handed alpha
Helix 149	AQ5	B	380	392	Right-handed alpha
Helix 150	AQ6	B	395	404	Right-handed alpha
Helix 151	AQ7	B	414	424	Right-handed alpha
Helix 152	AQ8	B	429	446	Right-handed alpha
Helix 153	AQ9	B	465	477	Right-handed alpha
Helix 154	AR1	B	515	527	Right-handed alpha
Helix 155	AR2	B	530	538	Right-handed alpha
Helix 156	AR3	B	545	559	Right-handed alpha
Helix 157	AR4	B	563	572	Right-handed alpha
Helix 158	AR5	B	576	589	Right-handed alpha
Helix 159	AR6	B	593	599	Right-handed alpha
Helix 160	AR7	B	609	617	Right-handed alpha
Helix 161	AR8	B	619	624	Right-handed alpha
Helix 162	AR9	B	625	638	Right-handed alpha
Helix 163	AS1	B	645	652	Right-handed alpha
Helix 164	AS2	B	656	664	Right-handed alpha
Helix 165	AS3	B	719	727	Right-handed alpha
Helix 166	AS4	B	729	754	Right-handed alpha
Helix 167	AS5	B	764	787	Right-handed alpha
Helix 168	AS6	B	793	803	Right-handed alpha
Helix 169	AS7	B	805	824	Right-handed alpha
Helix 170	AS8	B	825	828	Right-handed 310
Helix 171	AS9	B	829	848	Right-handed alpha
Helix 172	AT1	B	849	853	Right-handed 310
Helix 173	AT2	B	858	895	Right-handed alpha
Helix 174	AT3	B	900	915	Right-handed alpha
Helix 175	AT4	B	921	926	Right-handed alpha
Helix 176	AT5	B	950	985	Right-handed alpha
Helix 177	AT6	B	987	1006	Right-handed alpha
Helix 178	AT7	B	1013	1027	Right-handed alpha
Helix 179	AT8	B	1044	1071	Right-handed alpha
Helix 180	AT9	B	1072	1094	Right-handed alpha

There are 12 sheets in PDB entry 8SLA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	39	42	first strand
Strand 2	D	184	187	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	68	71	first strand
Strand 2	D	228	232	parallel
Strand 3	D	253	256	parallel
Strand 4	D	316	319	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	102	103	first strand
Strand 2	D	135	136	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	39	42	first strand
Strand 2	C	184	187	parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	68	71	first strand
Strand 2	C	228	232	parallel
Strand 3	C	253	256	parallel
Strand 4	C	316	319	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	102	103	first strand
Strand 2	C	135	136	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	39	42	first strand
Strand 2	A	184	187	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	68	71	first strand
Strand 2	A	228	232	parallel
Strand 3	A	253	256	parallel
Strand 4	A	316	319	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	102	103	first strand
Strand 2	A	135	136	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	39	42	first strand
Strand 2	B	184	187	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	68	71	first strand
Strand 2	B	228	232	parallel
Strand 3	B	253	256	parallel
Strand 4	B	316	319	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	102	103	first strand
Strand 2	B	135	136	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8SLA

Analysis of interatomic Contacts of Structural Units in PDB entry:
8SLA