Analysis of interatomic Contacts of Structural Units in PDB entry:
8SLI

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8SLI entry

There are 4 chains in PDB entry 8SLI (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	CYS 24	GLY 1092
D	CYS 24	GLY 1092
C	CYS 24	GLY 1092
B	CYS 24	GLY 1092

There are188 helices in PDB entry 8SLI. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	48	60	Right-handed alpha
Helix 2	AA2	A	81	100	Right-handed alpha
Helix 3	AA3	A	112	126	Right-handed alpha
Helix 4	AA4	A	147	153	Right-handed alpha
Helix 5	AA5	A	202	214	Right-handed alpha
Helix 6	AA6	A	238	250	Right-handed alpha
Helix 7	AA7	A	261	271	Right-handed alpha
Helix 8	AA8	A	277	288	Right-handed alpha
Helix 9	AA9	A	294	311	Right-handed alpha
Helix 10	AB1	A	329	345	Right-handed alpha
Helix 11	AB2	A	351	362	Right-handed alpha
Helix 12	AB3	A	364	371	Right-handed alpha
Helix 13	AB4	A	380	382	Right-handed 310
Helix 14	AB5	A	383	394	Right-handed alpha
Helix 15	AB6	A	395	405	Right-handed alpha
Helix 16	AB7	A	408	413	Right-handed alpha
Helix 17	AB8	A	414	424	Right-handed alpha
Helix 18	AB9	A	429	443	Right-handed alpha
Helix 19	AC1	A	465	477	Right-handed alpha
Helix 20	AC2	A	515	528	Right-handed alpha
Helix 21	AC3	A	529	539	Right-handed alpha
Helix 22	AC4	A	542	560	Right-handed alpha
Helix 23	AC5	A	563	572	Right-handed alpha
Helix 24	AC6	A	574	588	Right-handed alpha
Helix 25	AC7	A	590	600	Right-handed alpha
Helix 26	AC8	A	610	618	Right-handed alpha
Helix 27	AC9	A	619	624	Right-handed 310
Helix 28	AD1	A	625	637	Right-handed alpha
Helix 29	AD2	A	647	655	Right-handed alpha
Helix 30	AD3	A	657	665	Right-handed alpha
Helix 31	AD4	A	717	728	Right-handed alpha
Helix 32	AD5	A	729	755	Right-handed alpha
Helix 33	AD6	A	760	787	Right-handed alpha
Helix 34	AD7	A	793	804	Right-handed alpha
Helix 35	AD8	A	804	821	Right-handed alpha
Helix 36	AD9	A	821	826	Right-handed alpha
Helix 37	AE1	A	829	849	Right-handed alpha
Helix 38	AE2	A	850	855	Right-handed 310
Helix 39	AE3	A	857	868	Right-handed alpha
Helix 40	AE4	A	868	895	Right-handed alpha
Helix 41	AE5	A	902	918	Right-handed alpha
Helix 42	AE6	A	922	930	Right-handed alpha
Helix 43	AE7	A	950	983	Right-handed alpha
Helix 44	AE8	A	983	1006	Right-handed alpha
Helix 45	AE9	A	1010	1028	Right-handed alpha
Helix 46	AF1	A	1044	1071	Right-handed alpha
Helix 47	AF2	A	1072	1092	Right-handed alpha
Helix 48	AF3	D	48	60	Right-handed alpha
Helix 49	AF4	D	81	100	Right-handed alpha
Helix 50	AF5	D	112	126	Right-handed alpha
Helix 51	AF6	D	147	153	Right-handed alpha
Helix 52	AF7	D	202	214	Right-handed alpha
Helix 53	AF8	D	238	250	Right-handed alpha
Helix 54	AF9	D	261	271	Right-handed alpha
Helix 55	AG1	D	277	288	Right-handed alpha
Helix 56	AG2	D	294	311	Right-handed alpha
Helix 57	AG3	D	329	345	Right-handed alpha
Helix 58	AG4	D	351	362	Right-handed alpha
Helix 59	AG5	D	364	371	Right-handed alpha
Helix 60	AG6	D	380	382	Right-handed 310
Helix 61	AG7	D	383	394	Right-handed alpha
Helix 62	AG8	D	395	405	Right-handed alpha
Helix 63	AG9	D	408	413	Right-handed alpha
Helix 64	AH1	D	414	424	Right-handed alpha
Helix 65	AH2	D	429	443	Right-handed alpha
Helix 66	AH3	D	465	477	Right-handed alpha
Helix 67	AH4	D	515	528	Right-handed alpha
Helix 68	AH5	D	529	539	Right-handed alpha
Helix 69	AH6	D	542	560	Right-handed alpha
Helix 70	AH7	D	563	572	Right-handed alpha
Helix 71	AH8	D	574	588	Right-handed alpha
Helix 72	AH9	D	590	600	Right-handed alpha
Helix 73	AI1	D	610	618	Right-handed alpha
Helix 74	AI2	D	619	624	Right-handed 310
Helix 75	AI3	D	625	637	Right-handed alpha
Helix 76	AI4	D	647	655	Right-handed alpha
Helix 77	AI5	D	657	665	Right-handed alpha
Helix 78	AI6	D	717	728	Right-handed alpha
Helix 79	AI7	D	729	755	Right-handed alpha
Helix 80	AI8	D	760	787	Right-handed alpha
Helix 81	AI9	D	793	804	Right-handed alpha
Helix 82	AJ1	D	804	821	Right-handed alpha
Helix 83	AJ2	D	821	826	Right-handed alpha
Helix 84	AJ3	D	829	849	Right-handed alpha
Helix 85	AJ4	D	850	855	Right-handed 310
Helix 86	AJ5	D	857	868	Right-handed alpha
Helix 87	AJ6	D	868	895	Right-handed alpha
Helix 88	AJ7	D	902	918	Right-handed alpha
Helix 89	AJ8	D	922	930	Right-handed alpha
Helix 90	AJ9	D	950	983	Right-handed alpha
Helix 91	AK1	D	983	1006	Right-handed alpha
Helix 92	AK2	D	1010	1028	Right-handed alpha
Helix 93	AK3	D	1044	1071	Right-handed alpha
Helix 94	AK4	D	1072	1092	Right-handed alpha
Helix 95	AK5	C	48	60	Right-handed alpha
Helix 96	AK6	C	81	100	Right-handed alpha
Helix 97	AK7	C	112	126	Right-handed alpha
Helix 98	AK8	C	147	153	Right-handed alpha
Helix 99	AK9	C	202	214	Right-handed alpha
Helix 100	AL1	C	238	250	Right-handed alpha
Helix 101	AL2	C	261	271	Right-handed alpha
Helix 102	AL3	C	277	288	Right-handed alpha
Helix 103	AL4	C	294	311	Right-handed alpha
Helix 104	AL5	C	329	345	Right-handed alpha
Helix 105	AL6	C	351	362	Right-handed alpha
Helix 106	AL7	C	364	371	Right-handed alpha
Helix 107	AL8	C	380	382	Right-handed 310
Helix 108	AL9	C	383	394	Right-handed alpha
Helix 109	AM1	C	395	405	Right-handed alpha
Helix 110	AM2	C	408	413	Right-handed alpha
Helix 111	AM3	C	414	424	Right-handed alpha
Helix 112	AM4	C	429	443	Right-handed alpha
Helix 113	AM5	C	465	477	Right-handed alpha
Helix 114	AM6	C	515	528	Right-handed alpha
Helix 115	AM7	C	529	539	Right-handed alpha
Helix 116	AM8	C	542	560	Right-handed alpha
Helix 117	AM9	C	563	572	Right-handed alpha
Helix 118	AN1	C	574	588	Right-handed alpha
Helix 119	AN2	C	590	600	Right-handed alpha
Helix 120	AN3	C	610	618	Right-handed alpha
Helix 121	AN4	C	619	624	Right-handed 310
Helix 122	AN5	C	625	637	Right-handed alpha
Helix 123	AN6	C	647	655	Right-handed alpha
Helix 124	AN7	C	657	665	Right-handed alpha
Helix 125	AN8	C	717	728	Right-handed alpha
Helix 126	AN9	C	729	755	Right-handed alpha
Helix 127	AO1	C	760	787	Right-handed alpha
Helix 128	AO2	C	793	804	Right-handed alpha
Helix 129	AO3	C	804	821	Right-handed alpha
Helix 130	AO4	C	821	826	Right-handed alpha
Helix 131	AO5	C	829	849	Right-handed alpha
Helix 132	AO6	C	850	855	Right-handed 310
Helix 133	AO7	C	857	868	Right-handed alpha
Helix 134	AO8	C	868	895	Right-handed alpha
Helix 135	AO9	C	902	918	Right-handed alpha
Helix 136	AP1	C	922	930	Right-handed alpha
Helix 137	AP2	C	950	983	Right-handed alpha
Helix 138	AP3	C	983	1006	Right-handed alpha
Helix 139	AP4	C	1010	1028	Right-handed alpha
Helix 140	AP5	C	1044	1071	Right-handed alpha
Helix 141	AP6	C	1072	1092	Right-handed alpha
Helix 142	AP7	B	48	60	Right-handed alpha
Helix 143	AP8	B	81	100	Right-handed alpha
Helix 144	AP9	B	112	126	Right-handed alpha
Helix 145	AQ1	B	147	153	Right-handed alpha
Helix 146	AQ2	B	202	214	Right-handed alpha
Helix 147	AQ3	B	238	250	Right-handed alpha
Helix 148	AQ4	B	261	271	Right-handed alpha
Helix 149	AQ5	B	277	288	Right-handed alpha
Helix 150	AQ6	B	294	311	Right-handed alpha
Helix 151	AQ7	B	329	345	Right-handed alpha
Helix 152	AQ8	B	351	362	Right-handed alpha
Helix 153	AQ9	B	364	371	Right-handed alpha
Helix 154	AR1	B	380	382	Right-handed 310
Helix 155	AR2	B	383	394	Right-handed alpha
Helix 156	AR3	B	395	405	Right-handed alpha
Helix 157	AR4	B	408	413	Right-handed alpha
Helix 158	AR5	B	414	424	Right-handed alpha
Helix 159	AR6	B	429	443	Right-handed alpha
Helix 160	AR7	B	465	477	Right-handed alpha
Helix 161	AR8	B	515	528	Right-handed alpha
Helix 162	AR9	B	529	539	Right-handed alpha
Helix 163	AS1	B	542	560	Right-handed alpha
Helix 164	AS2	B	563	572	Right-handed alpha
Helix 165	AS3	B	574	588	Right-handed alpha
Helix 166	AS4	B	590	600	Right-handed alpha
Helix 167	AS5	B	610	618	Right-handed alpha
Helix 168	AS6	B	619	624	Right-handed 310
Helix 169	AS7	B	625	637	Right-handed alpha
Helix 170	AS8	B	647	655	Right-handed alpha
Helix 171	AS9	B	657	665	Right-handed alpha
Helix 172	AT1	B	717	728	Right-handed alpha
Helix 173	AT2	B	729	755	Right-handed alpha
Helix 174	AT3	B	760	787	Right-handed alpha
Helix 175	AT4	B	793	804	Right-handed alpha
Helix 176	AT5	B	804	821	Right-handed alpha
Helix 177	AT6	B	821	826	Right-handed alpha
Helix 178	AT7	B	829	849	Right-handed alpha
Helix 179	AT8	B	850	855	Right-handed 310
Helix 180	AT9	B	857	868	Right-handed alpha
Helix 181	AU1	B	868	895	Right-handed alpha
Helix 182	AU2	B	902	918	Right-handed alpha
Helix 183	AU3	B	922	930	Right-handed alpha
Helix 184	AU4	B	950	983	Right-handed alpha
Helix 185	AU5	B	983	1006	Right-handed alpha
Helix 186	AU6	B	1010	1028	Right-handed alpha
Helix 187	AU7	B	1044	1071	Right-handed alpha
Helix 188	AU8	B	1072	1092	Right-handed alpha

There are 16 sheets in PDB entry 8SLI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	25	28	first strand
Strand 2	A	38	42	anti-parallel
Strand 3	A	184	188	parallel
Strand 4	A	135	141	parallel
Strand 5	A	102	105	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	69	70	first strand
Strand 2	A	229	230	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	253	255	first strand
Strand 2	A	316	318	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	601	602	first strand
Strand 2	A	608	609	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	25	28	first strand
Strand 2	D	38	42	anti-parallel
Strand 3	D	184	188	parallel
Strand 4	D	135	141	parallel
Strand 5	D	102	105	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	69	70	first strand
Strand 2	D	229	230	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	253	255	first strand
Strand 2	D	316	318	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	601	602	first strand
Strand 2	D	608	609	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	25	28	first strand
Strand 2	C	38	42	anti-parallel
Strand 3	C	184	188	parallel
Strand 4	C	135	141	parallel
Strand 5	C	102	105	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	69	70	first strand
Strand 2	C	229	230	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	253	255	first strand
Strand 2	C	316	318	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	601	602	first strand
Strand 2	C	608	609	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	25	28	first strand
Strand 2	B	38	42	anti-parallel
Strand 3	B	184	188	parallel
Strand 4	B	135	141	parallel
Strand 5	B	102	105	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	69	70	first strand
Strand 2	B	229	230	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	253	255	first strand
Strand 2	B	316	318	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	601	602	first strand
Strand 2	B	608	609	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8SLI

Analysis of interatomic Contacts of Structural Units in PDB entry:
8SLI