Analysis of interatomic Contacts of Structural Units in PDB entry:
8SLQ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8SLQ entry

There are 4 chains in PDB entry 8SLQ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	CYS 24	GLY 1092
D	CYS 24	GLY 1092
B	CYS 24	GLY 1092
C	CYS 24	GLY 1092

There are201 helices in PDB entry 8SLQ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	48	60	Right-handed alpha
Helix 2	AA2	A	81	100	Right-handed alpha
Helix 3	AA3	A	111	126	Right-handed alpha
Helix 4	AA4	A	147	153	Right-handed alpha
Helix 5	AA5	A	202	212	Right-handed alpha
Helix 6	AA6	A	239	249	Right-handed alpha
Helix 7	AA7	A	261	271	Right-handed alpha
Helix 8	AA8	A	279	288	Right-handed alpha
Helix 9	AA9	A	295	311	Right-handed alpha
Helix 10	AB1	A	312	314	Right-handed 310
Helix 11	AB2	A	329	345	Right-handed alpha
Helix 12	AB3	A	348	350	Right-handed 310
Helix 13	AB4	A	351	362	Right-handed alpha
Helix 14	AB5	A	364	371	Right-handed alpha
Helix 15	AB6	A	372	374	Right-handed 310
Helix 16	AB7	A	380	382	Right-handed 310
Helix 17	AB8	A	383	393	Right-handed alpha
Helix 18	AB9	A	395	405	Right-handed alpha
Helix 19	AC1	A	408	413	Right-handed alpha
Helix 20	AC2	A	414	424	Right-handed alpha
Helix 21	AC3	A	429	443	Right-handed alpha
Helix 22	AC4	A	465	477	Right-handed alpha
Helix 23	AC5	A	515	528	Right-handed alpha
Helix 24	AC6	A	529	539	Right-handed alpha
Helix 25	AC7	A	542	557	Right-handed alpha
Helix 26	AC8	A	563	572	Right-handed alpha
Helix 27	AC9	A	574	589	Right-handed alpha
Helix 28	AD1	A	590	600	Right-handed alpha
Helix 29	AD2	A	609	618	Right-handed alpha
Helix 30	AD3	A	619	624	Right-handed alpha
Helix 31	AD4	A	625	637	Right-handed alpha
Helix 32	AD5	A	645	655	Right-handed alpha
Helix 33	AD6	A	655	661	Right-handed alpha
Helix 34	AD7	A	717	729	Right-handed alpha
Helix 35	AD8	A	729	754	Right-handed alpha
Helix 36	AD9	A	760	787	Right-handed alpha
Helix 37	AE1	A	793	804	Right-handed alpha
Helix 38	AE2	A	804	826	Right-handed alpha
Helix 39	AE3	A	829	848	Right-handed alpha
Helix 40	AE4	A	849	855	Right-handed 310
Helix 41	AE5	A	857	869	Right-handed alpha
Helix 42	AE6	A	870	895	Right-handed alpha
Helix 43	AE7	A	900	918	Right-handed alpha
Helix 44	AE8	A	923	930	Right-handed alpha
Helix 45	AE9	A	949	966	Right-handed alpha
Helix 46	AF1	A	967	984	Right-handed alpha
Helix 47	AF2	A	984	1005	Right-handed alpha
Helix 48	AF3	A	1010	1028	Right-handed alpha
Helix 49	AF4	A	1044	1071	Right-handed alpha
Helix 50	AF5	A	1072	1092	Right-handed alpha
Helix 51	AF6	D	48	60	Right-handed alpha
Helix 52	AF7	D	81	100	Right-handed alpha
Helix 53	AF8	D	111	126	Right-handed alpha
Helix 54	AF9	D	147	153	Right-handed alpha
Helix 55	AG1	D	202	212	Right-handed alpha
Helix 56	AG2	D	236	238	Right-handed 310
Helix 57	AG3	D	239	249	Right-handed alpha
Helix 58	AG4	D	261	271	Right-handed alpha
Helix 59	AG5	D	279	288	Right-handed alpha
Helix 60	AG6	D	295	311	Right-handed alpha
Helix 61	AG7	D	312	314	Right-handed 310
Helix 62	AG8	D	329	345	Right-handed alpha
Helix 63	AG9	D	348	350	Right-handed 310
Helix 64	AH1	D	351	362	Right-handed alpha
Helix 65	AH2	D	364	371	Right-handed alpha
Helix 66	AH3	D	372	374	Right-handed 310
Helix 67	AH4	D	380	382	Right-handed 310
Helix 68	AH5	D	383	393	Right-handed alpha
Helix 69	AH6	D	395	405	Right-handed alpha
Helix 70	AH7	D	408	413	Right-handed alpha
Helix 71	AH8	D	414	424	Right-handed alpha
Helix 72	AH9	D	429	443	Right-handed alpha
Helix 73	AI1	D	465	477	Right-handed alpha
Helix 74	AI2	D	515	528	Right-handed alpha
Helix 75	AI3	D	529	539	Right-handed alpha
Helix 76	AI4	D	542	557	Right-handed alpha
Helix 77	AI5	D	563	572	Right-handed alpha
Helix 78	AI6	D	574	589	Right-handed alpha
Helix 79	AI7	D	590	600	Right-handed alpha
Helix 80	AI8	D	609	618	Right-handed alpha
Helix 81	AI9	D	619	624	Right-handed alpha
Helix 82	AJ1	D	625	637	Right-handed alpha
Helix 83	AJ2	D	645	655	Right-handed alpha
Helix 84	AJ3	D	655	661	Right-handed alpha
Helix 85	AJ4	D	717	729	Right-handed alpha
Helix 86	AJ5	D	729	754	Right-handed alpha
Helix 87	AJ6	D	760	787	Right-handed alpha
Helix 88	AJ7	D	793	804	Right-handed alpha
Helix 89	AJ8	D	804	826	Right-handed alpha
Helix 90	AJ9	D	829	848	Right-handed alpha
Helix 91	AK1	D	849	855	Right-handed 310
Helix 92	AK2	D	857	869	Right-handed alpha
Helix 93	AK3	D	870	895	Right-handed alpha
Helix 94	AK4	D	900	918	Right-handed alpha
Helix 95	AK5	D	923	930	Right-handed alpha
Helix 96	AK6	D	949	966	Right-handed alpha
Helix 97	AK7	D	967	984	Right-handed alpha
Helix 98	AK8	D	984	1005	Right-handed alpha
Helix 99	AK9	D	1010	1028	Right-handed alpha
Helix 100	AL1	D	1044	1071	Right-handed alpha
Helix 101	AL2	D	1072	1092	Right-handed alpha
Helix 102	AL3	B	48	60	Right-handed alpha
Helix 103	AL4	B	81	100	Right-handed alpha
Helix 104	AL5	B	111	126	Right-handed alpha
Helix 105	AL6	B	147	153	Right-handed alpha
Helix 106	AL7	B	202	212	Right-handed alpha
Helix 107	AL8	B	239	249	Right-handed alpha
Helix 108	AL9	B	261	271	Right-handed alpha
Helix 109	AM1	B	279	288	Right-handed alpha
Helix 110	AM2	B	295	311	Right-handed alpha
Helix 111	AM3	B	312	314	Right-handed 310
Helix 112	AM4	B	329	345	Right-handed alpha
Helix 113	AM5	B	348	350	Right-handed 310
Helix 114	AM6	B	351	362	Right-handed alpha
Helix 115	AM7	B	364	371	Right-handed alpha
Helix 116	AM8	B	372	374	Right-handed 310
Helix 117	AM9	B	380	382	Right-handed 310
Helix 118	AN1	B	383	393	Right-handed alpha
Helix 119	AN2	B	395	405	Right-handed alpha
Helix 120	AN3	B	408	413	Right-handed alpha
Helix 121	AN4	B	414	424	Right-handed alpha
Helix 122	AN5	B	429	443	Right-handed alpha
Helix 123	AN6	B	465	477	Right-handed alpha
Helix 124	AN7	B	515	528	Right-handed alpha
Helix 125	AN8	B	529	539	Right-handed alpha
Helix 126	AN9	B	542	557	Right-handed alpha
Helix 127	AO1	B	563	572	Right-handed alpha
Helix 128	AO2	B	574	589	Right-handed alpha
Helix 129	AO3	B	590	600	Right-handed alpha
Helix 130	AO4	B	609	618	Right-handed alpha
Helix 131	AO5	B	619	624	Right-handed alpha
Helix 132	AO6	B	625	637	Right-handed alpha
Helix 133	AO7	B	645	655	Right-handed alpha
Helix 134	AO8	B	655	661	Right-handed alpha
Helix 135	AO9	B	717	729	Right-handed alpha
Helix 136	AP1	B	729	754	Right-handed alpha
Helix 137	AP2	B	760	787	Right-handed alpha
Helix 138	AP3	B	793	804	Right-handed alpha
Helix 139	AP4	B	804	826	Right-handed alpha
Helix 140	AP5	B	829	848	Right-handed alpha
Helix 141	AP6	B	849	855	Right-handed 310
Helix 142	AP7	B	857	869	Right-handed alpha
Helix 143	AP8	B	870	895	Right-handed alpha
Helix 144	AP9	B	900	918	Right-handed alpha
Helix 145	AQ1	B	923	930	Right-handed alpha
Helix 146	AQ2	B	949	966	Right-handed alpha
Helix 147	AQ3	B	967	984	Right-handed alpha
Helix 148	AQ4	B	984	1005	Right-handed alpha
Helix 149	AQ5	B	1010	1028	Right-handed alpha
Helix 150	AQ6	B	1044	1071	Right-handed alpha
Helix 151	AQ7	B	1072	1092	Right-handed alpha
Helix 152	AQ8	C	48	60	Right-handed alpha
Helix 153	AQ9	C	81	100	Right-handed alpha
Helix 154	AR1	C	111	126	Right-handed alpha
Helix 155	AR2	C	147	153	Right-handed alpha
Helix 156	AR3	C	202	212	Right-handed alpha
Helix 157	AR4	C	239	249	Right-handed alpha
Helix 158	AR5	C	261	271	Right-handed alpha
Helix 159	AR6	C	279	288	Right-handed alpha
Helix 160	AR7	C	295	311	Right-handed alpha
Helix 161	AR8	C	312	314	Right-handed 310
Helix 162	AR9	C	329	345	Right-handed alpha
Helix 163	AS1	C	348	350	Right-handed 310
Helix 164	AS2	C	351	362	Right-handed alpha
Helix 165	AS3	C	364	371	Right-handed alpha
Helix 166	AS4	C	372	374	Right-handed 310
Helix 167	AS5	C	380	382	Right-handed 310
Helix 168	AS6	C	383	393	Right-handed alpha
Helix 169	AS7	C	395	405	Right-handed alpha
Helix 170	AS8	C	408	413	Right-handed alpha
Helix 171	AS9	C	414	424	Right-handed alpha
Helix 172	AT1	C	429	443	Right-handed alpha
Helix 173	AT2	C	465	477	Right-handed alpha
Helix 174	AT3	C	515	528	Right-handed alpha
Helix 175	AT4	C	529	539	Right-handed alpha
Helix 176	AT5	C	542	557	Right-handed alpha
Helix 177	AT6	C	563	572	Right-handed alpha
Helix 178	AT7	C	574	589	Right-handed alpha
Helix 179	AT8	C	590	600	Right-handed alpha
Helix 180	AT9	C	609	618	Right-handed alpha
Helix 181	AU1	C	619	624	Right-handed alpha
Helix 182	AU2	C	625	637	Right-handed alpha
Helix 183	AU3	C	645	655	Right-handed alpha
Helix 184	AU4	C	655	661	Right-handed alpha
Helix 185	AU5	C	717	729	Right-handed alpha
Helix 186	AU6	C	729	754	Right-handed alpha
Helix 187	AU7	C	760	787	Right-handed alpha
Helix 188	AU8	C	793	804	Right-handed alpha
Helix 189	AU9	C	804	826	Right-handed alpha
Helix 190	AV1	C	829	848	Right-handed alpha
Helix 191	AV2	C	849	855	Right-handed 310
Helix 192	AV3	C	857	869	Right-handed alpha
Helix 193	AV4	C	870	895	Right-handed alpha
Helix 194	AV5	C	900	918	Right-handed alpha
Helix 195	AV6	C	923	930	Right-handed alpha
Helix 196	AV7	C	949	966	Right-handed alpha
Helix 197	AV8	C	967	984	Right-handed alpha
Helix 198	AV9	C	984	1005	Right-handed alpha
Helix 199	AW1	C	1010	1028	Right-handed alpha
Helix 200	AW2	C	1044	1071	Right-handed alpha
Helix 201	AW3	C	1072	1092	Right-handed alpha

There are 8 sheets in PDB entry 8SLQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	25	28	first strand
Strand 2	A	38	42	anti-parallel
Strand 3	A	184	188	parallel
Strand 4	A	135	141	parallel
Strand 5	A	102	105	parallel
Strand 6	A	68	71	parallel
Strand 7	A	228	231	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	253	255	first strand
Strand 2	A	316	318	parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	25	28	first strand
Strand 2	D	38	42	anti-parallel
Strand 3	D	184	188	parallel
Strand 4	D	135	141	parallel
Strand 5	D	102	105	parallel
Strand 6	D	68	71	parallel
Strand 7	D	228	231	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	253	255	first strand
Strand 2	D	316	318	parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	25	28	first strand
Strand 2	B	38	42	anti-parallel
Strand 3	B	184	188	parallel
Strand 4	B	135	141	parallel
Strand 5	B	102	105	parallel
Strand 6	B	68	71	parallel
Strand 7	B	228	231	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	253	255	first strand
Strand 2	B	316	318	parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	25	28	first strand
Strand 2	C	38	42	anti-parallel
Strand 3	C	184	188	parallel
Strand 4	C	135	141	parallel
Strand 5	C	102	105	parallel
Strand 6	C	68	71	parallel
Strand 7	C	228	231	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	253	255	first strand
Strand 2	C	316	318	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8SLQ

Analysis of interatomic Contacts of Structural Units in PDB entry:
8SLQ