Analysis of interatomic Contacts of Structural Units in PDB entry:
8SLV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8SLV entry

There is 1 chain in PDB entry 8SLV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 18SER 579
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 8SLV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 36Right-handed alpha
Helix 2
AA2
A
45 59Right-handed alpha
Helix 3
AA3
A
89 92Right-handed 310
Helix 4
AA4
A
93 108Right-handed alpha
Helix 5
AA5
A
124 132Right-handed alpha
Helix 6
AA6
A
194 210Right-handed alpha
Helix 7
AA7
A
220 224Right-handed 310
Helix 8
AA8
A
248 252Right-handed 310
Helix 9
AA9
A
260 282Right-handed alpha
Helix 10
AB1
A
294 300Right-handed alpha
Helix 11
AB2
A
315 322Right-handed alpha
Helix 12
AB3
A
327 342Right-handed alpha
Helix 13
AB4
A
359 365Right-handed alpha
Helix 14
AB5
A
368 379Right-handed alpha
Helix 15
AB6
A
388 392Right-handed 310
Helix 16
AB7
A
399 403Right-handed 310
Helix 17
AB8
A
405 410Right-handed alpha
Helix 18
AB9
A
415 419Right-handed 310
Helix 19
AC1
A
421 425Right-handed 310
Helix 20
AC2
A
433 438Right-handed 310
Helix 21
AC3
A
456 463Right-handed alpha
Helix 22
AC4
A
466 478Right-handed alpha
Helix 23
AC5
A
480 486Right-handed alpha
Helix 24
AC6
A
524 528Right-handed 310
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There are 7 sheets in PDB entry 8SLV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
312 313first strand
Strand 2
A
286 289parallel
Strand 3
A
215 218parallel
Strand 4
A
110 115parallel
Strand 5
A
63 66parallel
Strand 6
A
26 30parallel
Strand 7
A
382 386parallel
Strand 8
A
349 350parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 71first strand
Strand 2
A
83 87anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
143 144first strand
Strand 2
A
177 180anti-parallel
Strand 3
A
169 172anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 149first strand
Strand 2
A
153 155anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
303 304first strand
Strand 2
A
307 308anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
489 493first strand
Strand 2
A
497 504anti-parallel
Strand 3
A
508 515anti-parallel
Strand 4
A
564 571anti-parallel
Strand 5
A
535 541anti-parallel
Strand 6
A
552 554anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
521 522first strand
Strand 2
A
559 560anti-parallel
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