Analysis of interatomic Contacts of Structural Units in PDB entry:
8SLY

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8SLY entry

There are 4 chains in PDB entry 8SLY (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PHE 75	SER 728
B	PHE 75	SER 728
C	PHE 75	SER 728
D	PHE 75	SER 728

There are120 helices in PDB entry 8SLY. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	76	87	Right-handed alpha
Helix 2	AA2	A	88	92	Right-handed 310
Helix 3	AA3	A	94	103	Right-handed alpha
Helix 4	AA4	A	119	127	Right-handed alpha
Helix 5	AA5	A	135	146	Right-handed alpha
Helix 6	AA6	A	151	155	Right-handed 310
Helix 7	AA7	A	166	174	Right-handed alpha
Helix 8	AA8	A	176	186	Right-handed alpha
Helix 9	AA9	A	196	200	Right-handed 310
Helix 10	AB1	A	212	219	Right-handed alpha
Helix 11	AB2	A	222	231	Right-handed alpha
Helix 12	AB3	A	248	256	Right-handed alpha
Helix 13	AB4	A	260	282	Right-handed alpha
Helix 14	AB5	A	286	290	Right-handed 310
Helix 15	AB6	A	297	306	Right-handed alpha
Helix 16	AB7	A	307	316	Right-handed alpha
Helix 17	AB8	A	323	327	Right-handed 310
Helix 18	AB9	A	355	363	Right-handed alpha
Helix 19	AC1	A	369	374	Right-handed alpha
Helix 20	AC2	A	375	389	Right-handed alpha
Helix 21	AC3	A	389	413	Right-handed alpha
Helix 22	AC4	A	433	459	Right-handed alpha
Helix 23	AC5	A	460	466	Right-handed alpha
Helix 24	AC6	A	470	492	Right-handed alpha
Helix 25	AC7	A	496	512	Right-handed alpha
Helix 26	AC8	A	513	519	Right-handed 310
Helix 27	AC9	A	527	560	Right-handed alpha
Helix 28	AD1	A	592	602	Right-handed alpha
Helix 29	AD2	A	618	650	Right-handed alpha
Helix 30	AD3	A	657	672	Right-handed alpha
Helix 31	AD4	B	76	87	Right-handed alpha
Helix 32	AD5	B	88	92	Right-handed 310
Helix 33	AD6	B	94	103	Right-handed alpha
Helix 34	AD7	B	119	127	Right-handed alpha
Helix 35	AD8	B	135	146	Right-handed alpha
Helix 36	AD9	B	151	155	Right-handed 310
Helix 37	AE1	B	166	174	Right-handed alpha
Helix 38	AE2	B	176	186	Right-handed alpha
Helix 39	AE3	B	196	200	Right-handed 310
Helix 40	AE4	B	212	219	Right-handed alpha
Helix 41	AE5	B	222	231	Right-handed alpha
Helix 42	AE6	B	248	256	Right-handed alpha
Helix 43	AE7	B	260	282	Right-handed alpha
Helix 44	AE8	B	286	290	Right-handed 310
Helix 45	AE9	B	297	306	Right-handed alpha
Helix 46	AF1	B	307	316	Right-handed alpha
Helix 47	AF2	B	323	327	Right-handed 310
Helix 48	AF3	B	355	363	Right-handed alpha
Helix 49	AF4	B	369	374	Right-handed alpha
Helix 50	AF5	B	375	389	Right-handed alpha
Helix 51	AF6	B	389	413	Right-handed alpha
Helix 52	AF7	B	433	459	Right-handed alpha
Helix 53	AF8	B	460	466	Right-handed alpha
Helix 54	AF9	B	470	492	Right-handed alpha
Helix 55	AG1	B	496	512	Right-handed alpha
Helix 56	AG2	B	513	519	Right-handed 310
Helix 57	AG3	B	527	560	Right-handed alpha
Helix 58	AG4	B	592	602	Right-handed alpha
Helix 59	AG5	B	618	650	Right-handed alpha
Helix 60	AG6	B	657	672	Right-handed alpha
Helix 61	AG7	C	76	87	Right-handed alpha
Helix 62	AG8	C	88	92	Right-handed 310
Helix 63	AG9	C	94	103	Right-handed alpha
Helix 64	AH1	C	119	127	Right-handed alpha
Helix 65	AH2	C	135	146	Right-handed alpha
Helix 66	AH3	C	151	155	Right-handed 310
Helix 67	AH4	C	166	174	Right-handed alpha
Helix 68	AH5	C	176	186	Right-handed alpha
Helix 69	AH6	C	196	200	Right-handed 310
Helix 70	AH7	C	212	219	Right-handed alpha
Helix 71	AH8	C	222	231	Right-handed alpha
Helix 72	AH9	C	248	256	Right-handed alpha
Helix 73	AI1	C	260	282	Right-handed alpha
Helix 74	AI2	C	286	290	Right-handed 310
Helix 75	AI3	C	297	306	Right-handed alpha
Helix 76	AI4	C	307	316	Right-handed alpha
Helix 77	AI5	C	323	327	Right-handed 310
Helix 78	AI6	C	355	363	Right-handed alpha
Helix 79	AI7	C	369	374	Right-handed alpha
Helix 80	AI8	C	375	389	Right-handed alpha
Helix 81	AI9	C	389	413	Right-handed alpha
Helix 82	AJ1	C	433	459	Right-handed alpha
Helix 83	AJ2	C	460	466	Right-handed alpha
Helix 84	AJ3	C	470	492	Right-handed alpha
Helix 85	AJ4	C	496	512	Right-handed alpha
Helix 86	AJ5	C	513	519	Right-handed 310
Helix 87	AJ6	C	527	560	Right-handed alpha
Helix 88	AJ7	C	592	602	Right-handed alpha
Helix 89	AJ8	C	618	650	Right-handed alpha
Helix 90	AJ9	C	657	672	Right-handed alpha
Helix 91	AK1	D	76	87	Right-handed alpha
Helix 92	AK2	D	88	92	Right-handed 310
Helix 93	AK3	D	94	103	Right-handed alpha
Helix 94	AK4	D	119	127	Right-handed alpha
Helix 95	AK5	D	135	146	Right-handed alpha
Helix 96	AK6	D	151	155	Right-handed 310
Helix 97	AK7	D	166	174	Right-handed alpha
Helix 98	AK8	D	176	186	Right-handed alpha
Helix 99	AK9	D	196	200	Right-handed 310
Helix 100	AL1	D	212	219	Right-handed alpha
Helix 101	AL2	D	222	231	Right-handed alpha
Helix 102	AL3	D	248	256	Right-handed alpha
Helix 103	AL4	D	260	282	Right-handed alpha
Helix 104	AL5	D	286	290	Right-handed 310
Helix 105	AL6	D	297	306	Right-handed alpha
Helix 106	AL7	D	307	316	Right-handed alpha
Helix 107	AL8	D	323	327	Right-handed 310
Helix 108	AL9	D	355	363	Right-handed alpha
Helix 109	AM1	D	369	374	Right-handed alpha
Helix 110	AM2	D	375	389	Right-handed alpha
Helix 111	AM3	D	389	413	Right-handed alpha
Helix 112	AM4	D	433	459	Right-handed alpha
Helix 113	AM5	D	460	466	Right-handed alpha
Helix 114	AM6	D	470	492	Right-handed alpha
Helix 115	AM7	D	496	512	Right-handed alpha
Helix 116	AM8	D	513	519	Right-handed 310
Helix 117	AM9	D	527	560	Right-handed alpha
Helix 118	AN1	D	592	602	Right-handed alpha
Helix 119	AN2	D	618	650	Right-handed alpha
Helix 120	AN3	D	657	672	Right-handed alpha

There are 4 sheets in PDB entry 8SLY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	329	335	first strand
Strand 2	A	338	344	anti-parallel
Strand 3	A	701	710	anti-parallel
Strand 4	A	687	690	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	329	335	first strand
Strand 2	B	338	344	anti-parallel
Strand 3	B	701	710	anti-parallel
Strand 4	B	687	690	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	329	335	first strand
Strand 2	C	338	344	anti-parallel
Strand 3	C	701	710	anti-parallel
Strand 4	C	687	690	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	329	335	first strand
Strand 2	D	338	344	anti-parallel
Strand 3	D	701	710	anti-parallel
Strand 4	D	687	690	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8SLY

Analysis of interatomic Contacts of Structural Units in PDB entry:
8SLY