Analysis of interatomic Contacts of Structural Units in PDB entry:
8SMO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8SMO entry

There are 16 chains in PDB entry 8SMO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 552LYS 625
B
 SER 1GLN 20
C
 PRO 552LYS 625
D
 SER 1GLN 20
E
 PRO 552LYS 625
F
 SER 1GLN 20
G
 PRO 552LYS 625
H
 SER 1LEU 19
I
 GLY 554GLN 624
J
 SER 1GLY 18
K
 GLY 554GLN 624
L
 ASN 2GLY 18
M
 LEU 553GLU 621
N
 LEU 3GLY 18
O
 PRO 552LEU 614
P
 LEU 3GLY 18
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 8SMO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
552 574Right-handed alpha
Helix 2
AA2
A
577 586Right-handed alpha
Helix 3
AA3
A
589 599Right-handed alpha
Helix 4
AA4
A
599 625Right-handed alpha
Helix 5
AA5
C
553 574Right-handed alpha
Helix 6
AA6
C
577 586Right-handed alpha
Helix 7
AA7
C
589 599Right-handed alpha
Helix 8
AA8
C
599 625Right-handed alpha
Helix 9
AA9
E
553 574Right-handed alpha
Helix 10
AB1
E
577 586Right-handed alpha
Helix 11
AB2
E
589 599Right-handed alpha
Helix 12
AB3
E
599 625Right-handed alpha
Helix 13
AB4
G
553 574Right-handed alpha
Helix 14
AB5
G
577 586Right-handed alpha
Helix 15
AB6
G
589 599Right-handed alpha
Helix 16
AB7
G
599 624Right-handed alpha
Helix 17
AB8
I
555 574Right-handed alpha
Helix 18
AB9
I
577 586Right-handed alpha
Helix 19
AC1
I
589 599Right-handed alpha
Helix 20
AC2
I
599 624Right-handed alpha
Helix 21
AC3
K
555 574Right-handed alpha
Helix 22
AC4
K
577 586Right-handed alpha
Helix 23
AC5
K
589 599Right-handed alpha
Helix 24
AC6
K
599 624Right-handed alpha
Helix 25
AC7
M
554 574Right-handed alpha
Helix 26
AC8
M
577 586Right-handed alpha
Helix 27
AC9
M
589 598Right-handed alpha
Helix 28
AD1
M
604 621Right-handed alpha
Helix 29
AD2
O
553 574Right-handed alpha
Helix 30
AD3
O
577 587Right-handed alpha
Helix 31
AD4
O
589 599Right-handed alpha
Helix 32
AD5
O
604 614Right-handed alpha
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There are no sheets in PDB entry 8SMO
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