Analysis of interatomic Contacts of Structural Units in PDB entry:
8SRK

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8SRK entry

There are 4 chains in PDB entry 8SRK (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 52	ALA 1168
B	VAL 52	ALA 1168
C	VAL 52	ALA 1168
D	VAL 52	ALA 1168

There are185 helices in PDB entry 8SRK. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	72	76	Right-handed alpha
Helix 2	AA2	A	118	135	Right-handed alpha
Helix 3	AA3	A	157	175	Right-handed alpha
Helix 4	AA4	A	187	203	Right-handed alpha
Helix 5	AA5	A	221	227	Right-handed alpha
Helix 6	AA6	A	271	286	Right-handed alpha
Helix 7	AA7	A	298	312	Right-handed alpha
Helix 8	AA8	A	322	335	Right-handed alpha
Helix 9	AA9	A	346	358	Right-handed alpha
Helix 10	AB1	A	362	377	Right-handed alpha
Helix 11	AB2	A	395	406	Right-handed alpha
Helix 12	AB3	A	410	419	Right-handed alpha
Helix 13	AB4	A	424	437	Right-handed alpha
Helix 14	AB5	A	439	457	Right-handed alpha
Helix 15	AB6	A	459	469	Right-handed alpha
Helix 16	AB7	A	472	476	Right-handed 310
Helix 17	AB8	A	487	492	Right-handed alpha
Helix 18	AB9	A	494	509	Right-handed alpha
Helix 19	AC1	A	513	521	Right-handed alpha
Helix 20	AC2	A	556	569	Right-handed alpha
Helix 21	AC3	A	577	582	Right-handed 310
Helix 22	AC4	A	590	610	Right-handed alpha
Helix 23	AC5	A	612	623	Right-handed alpha
Helix 24	AC6	A	625	640	Right-handed alpha
Helix 25	AC7	A	651	680	Right-handed alpha
Helix 26	AC8	A	680	689	Right-handed alpha
Helix 27	AC9	A	699	708	Right-handed alpha
Helix 28	AD1	A	709	714	Right-handed alpha
Helix 29	AD2	A	715	728	Right-handed alpha
Helix 30	AD3	A	735	745	Right-handed alpha
Helix 31	AD4	A	788	799	Right-handed alpha
Helix 32	AD5	A	801	826	Right-handed alpha
Helix 33	AD6	A	833	856	Right-handed alpha
Helix 34	AD7	A	859	866	Right-handed alpha
Helix 35	AD8	A	866	889	Right-handed alpha
Helix 36	AD9	A	892	911	Right-handed alpha
Helix 37	AE1	A	915	919	Right-handed 310
Helix 38	AE2	A	923	961	Right-handed alpha
Helix 39	AE3	A	967	980	Right-handed alpha
Helix 40	AE4	A	987	995	Right-handed alpha
Helix 41	AE5	A	1013	1028	Right-handed alpha
Helix 42	AE6	A	1028	1066	Right-handed alpha
Helix 43	AE7	A	1070	1072	Right-handed 310
Helix 44	AE8	A	1073	1090	Right-handed alpha
Helix 45	AE9	A	1102	1129	Right-handed alpha
Helix 46	AF1	A	1131	1168	Right-handed alpha
Helix 47	AF2	B	72	76	Right-handed alpha
Helix 48	AF3	B	118	135	Right-handed alpha
Helix 49	AF4	B	157	175	Right-handed alpha
Helix 50	AF5	B	187	203	Right-handed alpha
Helix 51	AF6	B	221	227	Right-handed alpha
Helix 52	AF7	B	271	286	Right-handed alpha
Helix 53	AF8	B	298	312	Right-handed alpha
Helix 54	AF9	B	322	335	Right-handed alpha
Helix 55	AG1	B	346	358	Right-handed alpha
Helix 56	AG2	B	362	377	Right-handed alpha
Helix 57	AG3	B	395	406	Right-handed alpha
Helix 58	AG4	B	410	419	Right-handed alpha
Helix 59	AG5	B	424	437	Right-handed alpha
Helix 60	AG6	B	439	457	Right-handed alpha
Helix 61	AG7	B	459	469	Right-handed alpha
Helix 62	AG8	B	472	476	Right-handed 310
Helix 63	AG9	B	487	492	Right-handed alpha
Helix 64	AH1	B	494	509	Right-handed alpha
Helix 65	AH2	B	513	521	Right-handed alpha
Helix 66	AH3	B	556	569	Right-handed alpha
Helix 67	AH4	B	577	582	Right-handed 310
Helix 68	AH5	B	590	610	Right-handed alpha
Helix 69	AH6	B	612	623	Right-handed alpha
Helix 70	AH7	B	625	640	Right-handed alpha
Helix 71	AH8	B	651	680	Right-handed alpha
Helix 72	AH9	B	680	689	Right-handed alpha
Helix 73	AI1	B	699	708	Right-handed alpha
Helix 74	AI2	B	709	714	Right-handed alpha
Helix 75	AI3	B	715	728	Right-handed alpha
Helix 76	AI4	B	735	745	Right-handed alpha
Helix 77	AI5	B	788	799	Right-handed alpha
Helix 78	AI6	B	801	826	Right-handed alpha
Helix 79	AI7	B	833	856	Right-handed alpha
Helix 80	AI8	B	859	866	Right-handed alpha
Helix 81	AI9	B	866	889	Right-handed alpha
Helix 82	AJ1	B	892	911	Right-handed alpha
Helix 83	AJ2	B	915	919	Right-handed 310
Helix 84	AJ3	B	923	961	Right-handed alpha
Helix 85	AJ4	B	967	980	Right-handed alpha
Helix 86	AJ5	B	987	995	Right-handed alpha
Helix 87	AJ6	B	1013	1028	Right-handed alpha
Helix 88	AJ7	B	1028	1066	Right-handed alpha
Helix 89	AJ8	B	1070	1072	Right-handed 310
Helix 90	AJ9	B	1073	1090	Right-handed alpha
Helix 91	AK1	B	1102	1129	Right-handed alpha
Helix 92	AK2	B	1131	1168	Right-handed alpha
Helix 93	AK3	C	72	76	Right-handed alpha
Helix 94	AK4	C	118	135	Right-handed alpha
Helix 95	AK5	C	157	175	Right-handed alpha
Helix 96	AK6	C	187	203	Right-handed alpha
Helix 97	AK7	C	221	227	Right-handed alpha
Helix 98	AK8	C	271	286	Right-handed alpha
Helix 99	AK9	C	298	312	Right-handed alpha
Helix 100	AL1	C	322	335	Right-handed alpha
Helix 101	AL2	C	346	358	Right-handed alpha
Helix 102	AL3	C	362	377	Right-handed alpha
Helix 103	AL4	C	395	406	Right-handed alpha
Helix 104	AL5	C	410	419	Right-handed alpha
Helix 105	AL6	C	424	437	Right-handed alpha
Helix 106	AL7	C	439	457	Right-handed alpha
Helix 107	AL8	C	459	469	Right-handed alpha
Helix 108	AL9	C	472	476	Right-handed 310
Helix 109	AM1	C	487	492	Right-handed alpha
Helix 110	AM2	C	494	509	Right-handed alpha
Helix 111	AM3	C	513	521	Right-handed alpha
Helix 112	AM4	C	556	569	Right-handed alpha
Helix 113	AM5	C	577	582	Right-handed 310
Helix 114	AM6	C	590	610	Right-handed alpha
Helix 115	AM7	C	612	623	Right-handed alpha
Helix 116	AM8	C	625	640	Right-handed alpha
Helix 117	AM9	C	651	680	Right-handed alpha
Helix 118	AN1	C	680	689	Right-handed alpha
Helix 119	AN2	C	699	708	Right-handed alpha
Helix 120	AN3	C	709	714	Right-handed alpha
Helix 121	AN4	C	715	728	Right-handed alpha
Helix 122	AN5	C	735	745	Right-handed alpha
Helix 123	AN6	C	788	799	Right-handed alpha
Helix 124	AN7	C	801	826	Right-handed alpha
Helix 125	AN8	C	833	856	Right-handed alpha
Helix 126	AN9	C	859	866	Right-handed alpha
Helix 127	AO1	C	866	889	Right-handed alpha
Helix 128	AO2	C	892	911	Right-handed alpha
Helix 129	AO3	C	915	919	Right-handed 310
Helix 130	AO4	C	923	961	Right-handed alpha
Helix 131	AO5	C	967	980	Right-handed alpha
Helix 132	AO6	C	987	995	Right-handed alpha
Helix 133	AO7	C	1013	1028	Right-handed alpha
Helix 134	AO8	C	1028	1066	Right-handed alpha
Helix 135	AO9	C	1070	1072	Right-handed 310
Helix 136	AP1	C	1073	1090	Right-handed alpha
Helix 137	AP2	C	1102	1129	Right-handed alpha
Helix 138	AP3	C	1131	1168	Right-handed alpha
Helix 139	AP4	D	72	76	Right-handed alpha
Helix 140	AP5	D	118	135	Right-handed alpha
Helix 141	AP6	D	157	175	Right-handed alpha
Helix 142	AP7	D	187	203	Right-handed alpha
Helix 143	AP8	D	221	227	Right-handed alpha
Helix 144	AP9	D	271	286	Right-handed alpha
Helix 145	AQ1	D	298	312	Right-handed alpha
Helix 146	AQ2	D	322	335	Right-handed alpha
Helix 147	AQ3	D	346	358	Right-handed alpha
Helix 148	AQ4	D	362	377	Right-handed alpha
Helix 149	AQ5	D	395	406	Right-handed alpha
Helix 150	AQ6	D	410	419	Right-handed alpha
Helix 151	AQ7	D	424	437	Right-handed alpha
Helix 152	AQ8	D	439	457	Right-handed alpha
Helix 153	AQ9	D	459	469	Right-handed alpha
Helix 154	AR1	D	472	476	Right-handed 310
Helix 155	AR2	D	487	492	Right-handed alpha
Helix 156	AR3	D	494	509	Right-handed alpha
Helix 157	AR4	D	513	521	Right-handed alpha
Helix 158	AR5	D	556	569	Right-handed alpha
Helix 159	AR6	D	577	582	Right-handed 310
Helix 160	AR7	D	590	610	Right-handed alpha
Helix 161	AR8	D	612	623	Right-handed alpha
Helix 162	AR9	D	625	640	Right-handed alpha
Helix 163	AS1	D	651	680	Right-handed alpha
Helix 164	AS2	D	680	689	Right-handed alpha
Helix 165	AS3	D	692	696	Right-handed 310
Helix 166	AS4	D	699	708	Right-handed alpha
Helix 167	AS5	D	709	714	Right-handed alpha
Helix 168	AS6	D	715	728	Right-handed alpha
Helix 169	AS7	D	735	745	Right-handed alpha
Helix 170	AS8	D	788	799	Right-handed alpha
Helix 171	AS9	D	801	826	Right-handed alpha
Helix 172	AT1	D	833	856	Right-handed alpha
Helix 173	AT2	D	859	866	Right-handed alpha
Helix 174	AT3	D	866	889	Right-handed alpha
Helix 175	AT4	D	892	911	Right-handed alpha
Helix 176	AT5	D	915	919	Right-handed 310
Helix 177	AT6	D	923	961	Right-handed alpha
Helix 178	AT7	D	967	980	Right-handed alpha
Helix 179	AT8	D	987	995	Right-handed alpha
Helix 180	AT9	D	1013	1028	Right-handed alpha
Helix 181	AU1	D	1028	1066	Right-handed alpha
Helix 182	AU2	D	1070	1072	Right-handed 310
Helix 183	AU3	D	1073	1090	Right-handed alpha
Helix 184	AU4	D	1102	1129	Right-handed alpha
Helix 185	AU5	D	1131	1168	Right-handed alpha

There are 12 sheets in PDB entry 8SRK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	56	60	first strand
Strand 2	A	67	71	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	80	81	first strand
Strand 2	A	91	92	anti-parallel

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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	232	236	first strand
Strand 2	A	97	100	parallel
Strand 3	A	108	114	anti-parallel
Strand 4	A	256	261	parallel
Strand 5	A	210	215	parallel
Strand 6	A	178	181	parallel
Strand 7	A	144	147	parallel
Strand 8	A	290	294	parallel
Strand 9	A	315	318	parallel
Strand 10	A	383	386	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	56	60	first strand
Strand 2	B	67	71	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	80	81	first strand
Strand 2	B	91	92	anti-parallel

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There are 10 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	232	236	first strand
Strand 2	B	97	100	parallel
Strand 3	B	108	114	anti-parallel
Strand 4	B	256	261	parallel
Strand 5	B	210	215	parallel
Strand 6	B	178	181	parallel
Strand 7	B	144	147	parallel
Strand 8	B	290	294	parallel
Strand 9	B	315	318	parallel
Strand 10	B	383	386	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	56	60	first strand
Strand 2	C	67	71	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	80	81	first strand
Strand 2	C	91	92	anti-parallel

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There are 10 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	232	236	first strand
Strand 2	C	97	100	parallel
Strand 3	C	108	114	anti-parallel
Strand 4	C	256	261	parallel
Strand 5	C	210	215	parallel
Strand 6	C	178	181	parallel
Strand 7	C	144	147	parallel
Strand 8	C	290	294	parallel
Strand 9	C	315	318	parallel
Strand 10	C	383	386	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	56	60	first strand
Strand 2	D	67	71	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	80	81	first strand
Strand 2	D	91	92	anti-parallel

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There are 10 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	232	236	first strand
Strand 2	D	97	100	parallel
Strand 3	D	108	114	anti-parallel
Strand 4	D	256	261	parallel
Strand 5	D	210	215	parallel
Strand 6	D	178	181	parallel
Strand 7	D	144	147	parallel
Strand 8	D	290	294	parallel
Strand 9	D	315	318	parallel
Strand 10	D	383	386	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8SRK

Analysis of interatomic Contacts of Structural Units in PDB entry:
8SRK