Analysis of interatomic Contacts of Structural Units in PDB entry:
8ST7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ST7 entry

There are 4 chains in PDB entry 8ST7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
D
 MET 1GLY 75
B
 MET 1GLY 75
A
 SER 629GLN 847
C
 GLU 632GLN 847
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 8ST7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
D
22 35Right-handed alpha
Helix 2
AA2
D
37 39Right-handed 310
Helix 3
AA3
D
56 60Right-handed 310
Helix 4
AA4
B
22 35Right-handed alpha
Helix 5
AA5
B
37 39Right-handed 310
Helix 6
AA6
B
56 60Right-handed 310
Helix 7
AA7
A
630 649Right-handed alpha
Helix 8
AA8
A
655 664Right-handed alpha
Helix 9
AA9
A
665 667Right-handed 310
Helix 10
AB1
A
693 703Right-handed alpha
Helix 11
AB2
A
704 706Right-handed 310
Helix 12
AB3
A
721 731Right-handed alpha
Helix 13
AB4
A
738 757Right-handed alpha
Helix 14
AB5
A
769 787Right-handed alpha
Helix 15
AB6
A
792 805Right-handed alpha
Helix 16
AB7
A
812 829Right-handed alpha
Helix 17
AB8
A
831 842Right-handed alpha
Helix 18
AB9
A
843 847Right-handed 310
Helix 19
AC1
C
633 649Right-handed alpha
Helix 20
AC2
C
655 664Right-handed alpha
Helix 21
AC3
C
665 667Right-handed 310
Helix 22
AC4
C
693 704Right-handed alpha
Helix 23
AC5
C
721 731Right-handed alpha
Helix 24
AC6
C
738 758Right-handed alpha
Helix 25
AC7
C
769 787Right-handed alpha
Helix 26
AC8
C
792 805Right-handed alpha
Helix 27
AC9
C
812 829Right-handed alpha
Helix 28
AD1
C
831 842Right-handed alpha
Helix 29
AD2
C
843 847Right-handed 310
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There are 2 sheets in PDB entry 8ST7. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
12 16first strand
Strand 2
D
2 6anti-parallel
Strand 3
D
66 71parallel
Strand 4
D
41 45anti-parallel
Strand 5
D
48 49anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
12 16first strand
Strand 2
B
2 6anti-parallel
Strand 3
B
66 71parallel
Strand 4
B
41 45anti-parallel
Strand 5
B
48 49anti-parallel
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