Analysis of interatomic Contacts of Structural Units in PDB entry:
8STE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8STE entry

There are 2 chains in PDB entry 8STE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 760LEU 1208
B
 SER 760PHE 1210
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 8STE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
763 780Right-handed alpha
Helix 2
AA2
A
801 812Right-handed alpha
Helix 3
AA3
A
830 849Right-handed alpha
Helix 4
AA4
A
862 874Right-handed alpha
Helix 5
AA5
A
896 913Right-handed alpha
Helix 6
AA6
A
1034 1045Right-handed alpha
Helix 7
AA7
A
1064 1080Right-handed alpha
Helix 8
AA8
A
1097 1109Right-handed alpha
Helix 9
AA9
A
1110 1112Right-handed 310
Helix 10
AB1
A
1119 1130Right-handed alpha
Helix 11
AB2
A
1135 1142Right-handed alpha
Helix 12
AB3
A
1142 1160Right-handed alpha
Helix 13
AB4
A
1179 1191Right-handed alpha
Helix 14
AB5
B
763 780Right-handed alpha
Helix 15
AB6
B
801 811Right-handed alpha
Helix 16
AB7
B
830 849Right-handed alpha
Helix 17
AB8
B
862 874Right-handed alpha
Helix 18
AB9
B
896 913Right-handed alpha
Helix 19
AC1
B
1034 1045Right-handed alpha
Helix 20
AC2
B
1064 1080Right-handed alpha
Helix 21
AC3
B
1097 1108Right-handed alpha
Helix 22
AC4
B
1119 1130Right-handed alpha
Helix 23
AC5
B
1136 1142Right-handed alpha
Helix 24
AC6
B
1142 1160Right-handed alpha
Helix 25
AC7
B
1179 1191Right-handed alpha
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There are 5 sheets in PDB entry 8STE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
853 859first strand
Strand 2
A
818 824parallel
Strand 3
A
791 794parallel
Strand 4
A
883 887parallel
Strand 5
A
916 921parallel
Strand 6
A
1197 1201anti-parallel
Strand 7
A
1166 1169parallel
Strand 8
A
1023 1027parallel
Strand 9
A
1053 1059parallel
Strand 10
A
1086 1089parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
791 793first strand
Strand 2
B
883 887parallel
Strand 3
B
916 920parallel
Strand 4
B
1197 1201anti-parallel
Strand 5
B
1165 1169parallel
Strand 6
B
1024 1027parallel
Strand 7
B
1054 1059parallel
Strand 8
B
1085 1089parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
818 819first strand
Strand 2
B
853 854parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
822 824first strand
Strand 2
B
857 859parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1112 1113first strand
Strand 2
B
1134 1135parallel
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