Analysis of interatomic Contacts of Structural Units in PDB entry:
8STG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8STG entry

There are 2 chains in PDB entry 8STG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 461THR 764
B
 PRO 472THR 765
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 8STG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
524 542Right-handed alpha
Helix 2
AA2
A
571 579Right-handed alpha
Helix 3
AA3
A
599 620Right-handed alpha
Helix 4
AA4
A
666 670Right-handed 310
Helix 5
AA5
A
671 678Right-handed alpha
Helix 6
AA6
A
681 698Right-handed alpha
Helix 7
AA7
A
708 718Right-handed alpha
Helix 8
AA8
A
729 740Right-handed alpha
Helix 9
AA9
A
749 762Right-handed alpha
Helix 10
AB1
B
477 481Right-handed 310
Helix 11
AB2
B
524 542Right-handed alpha
Helix 12
AB3
B
571 579Right-handed alpha
Helix 13
AB4
B
599 620Right-handed alpha
Helix 14
AB5
B
666 670Right-handed 310
Helix 15
AB6
B
671 676Right-handed alpha
Helix 16
AB7
B
681 698Right-handed alpha
Helix 17
AB8
B
708 718Right-handed alpha
Helix 18
AB9
B
729 740Right-handed alpha
Helix 19
AC1
B
749 762Right-handed alpha
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There are 5 sheets in PDB entry 8STG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
483 486first strand
Strand 2
A
495 501anti-parallel
Strand 3
A
511 517anti-parallel
Strand 4
A
561 564anti-parallel
Strand 5
A
550 554anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
632 634first strand
Strand 2
A
640 642anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
495 501first strand
Strand 2
B
511 517anti-parallel
Strand 3
B
561 564anti-parallel
Strand 4
B
550 554anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
622 623first strand
Strand 2
B
646 647anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
632 634first strand
Strand 2
B
640 642anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il