Analysis of interatomic Contacts of Structural Units in PDB entry:
8SUC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8SUC entry

There is 1 chain in PDB entry 8SUC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 728LEU 1009
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 8SUC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
770 773Right-handed 310
Helix 2
AA2
A
840 844Right-handed 310
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There are 7 sheets in PDB entry 8SUC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
735 739first strand
Strand 2
A
1002 1006anti-parallel
Strand 3
A
993 997anti-parallel
Strand 4
A
982 987anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
758 759first strand
Strand 2
A
765 769anti-parallel
Strand 3
A
774 778anti-parallel
Strand 4
A
784 786anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
788 789first strand
Strand 2
A
795 796parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
801 805first strand
Strand 2
A
811 817anti-parallel
Strand 3
A
823 829anti-parallel
Strand 4
A
834 837anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
851 856first strand
Strand 2
A
862 866anti-parallel
Strand 3
A
870 875anti-parallel
Strand 4
A
880 886anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
898 900first strand
Strand 2
A
903 908anti-parallel
Strand 3
A
913 918anti-parallel
Strand 4
A
923 927anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
938 941first strand
Strand 2
A
947 951anti-parallel
Strand 3
A
958 962anti-parallel
Strand 4
A
968 973anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il